Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLRN1P58418 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLRN1P58418 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC15.87■□□□□ 0.13
CLRN1P58418 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC15.87■□□□□ 0.13
CLRN1P58418 SPDYE13P-201ENST00000445314 798 ntBASIC15.87■□□□□ 0.13
CLRN1P58418 FAM210CP-201ENST00000445714 574 ntBASIC15.87■□□□□ 0.13
CLRN1P58418 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CLRN1P58418 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC15.87■□□□□ 0.13
CLRN1P58418 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CLRN1P58418 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC15.87■□□□□ 0.13
CLRN1P58418 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
CLRN1P58418 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CLRN1P58418 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC15.87■□□□□ 0.13
CLRN1P58418 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC15.87■□□□□ 0.13
CLRN1P58418 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC15.87■□□□□ 0.13
CLRN1P58418 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLRN1P58418 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLRN1P58418 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CLRN1P58418 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CLRN1P58418 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLRN1P58418 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC15.87■□□□□ 0.13
CLRN1P58418 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.87■□□□□ 0.13
CLRN1P58418 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLRN1P58418 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLRN1P58418 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLRN1P58418 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CLRN1P58418 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLRN1P58418 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLRN1P58418 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
CLRN1P58418 KRT8P47-201ENST00000604727 1398 ntBASIC15.87■□□□□ 0.13
CLRN1P58418 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC15.86■□□□□ 0.13
CLRN1P58418 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLRN1P58418 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.86■□□□□ 0.13
CLRN1P58418 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC15.86■□□□□ 0.13
CLRN1P58418 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLRN1P58418 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CLRN1P58418 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
CLRN1P58418 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
CLRN1P58418 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLRN1P58418 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CLRN1P58418 GUK1-204ENST00000366721 689 ntTSL 3 BASIC15.86■□□□□ 0.13
CLRN1P58418 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLRN1P58418 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
CLRN1P58418 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLRN1P58418 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC15.86■□□□□ 0.13
CLRN1P58418 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC15.86■□□□□ 0.13
CLRN1P58418 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLRN1P58418 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLRN1P58418 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CLRN1P58418 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC15.86■□□□□ 0.13
CLRN1P58418 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLRN1P58418 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC15.86■□□□□ 0.13
CLRN1P58418 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLRN1P58418 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLRN1P58418 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CLRN1P58418 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC15.86■□□□□ 0.13
CLRN1P58418 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLRN1P58418 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CLRN1P58418 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLRN1P58418 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
CLRN1P58418 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.86■□□□□ 0.13
CLRN1P58418 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CLRN1P58418 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
CLRN1P58418 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
CLRN1P58418 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.85■□□□□ 0.13
CLRN1P58418 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLRN1P58418 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLRN1P58418 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC15.85■□□□□ 0.13
CLRN1P58418 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
CLRN1P58418 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLRN1P58418 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLRN1P58418 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLRN1P58418 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC15.85■□□□□ 0.13
CLRN1P58418 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC15.85■□□□□ 0.13
CLRN1P58418 DDX43P3-201ENST00000441064 443 ntBASIC15.85■□□□□ 0.13
CLRN1P58418 MTCL1P1-201ENST00000446207 792 ntBASIC15.85■□□□□ 0.13
CLRN1P58418 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC15.85■□□□□ 0.13
CLRN1P58418 GUSBP12-201ENST00000513727 720 ntBASIC15.85■□□□□ 0.13
CLRN1P58418 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC15.85■□□□□ 0.13
CLRN1P58418 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC15.85■□□□□ 0.13
CLRN1P58418 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CLRN1P58418 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
CLRN1P58418 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLRN1P58418 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLRN1P58418 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CLRN1P58418 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLRN1P58418 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLRN1P58418 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLRN1P58418 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLRN1P58418 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.85■□□□□ 0.13
CLRN1P58418 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CLRN1P58418 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLRN1P58418 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CLRN1P58418 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLRN1P58418 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLRN1P58418 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLRN1P58418 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC15.84■□□□□ 0.13
CLRN1P58418 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLRN1P58418 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC15.84■□□□□ 0.13
CLRN1P58418 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms