Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.97■□□□□ 0.31
CLDN6P56747 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
CLDN6P56747 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.97■□□□□ 0.31
CLDN6P56747 AC027612.4-201ENST00000605371 583 ntBASIC16.97■□□□□ 0.31
CLDN6P56747 AC093028.1-201ENST00000622998 982 ntBASIC16.97■□□□□ 0.31
CLDN6P56747 AC004790.2-201ENST00000623588 572 ntBASIC16.97■□□□□ 0.31
CLDN6P56747 PGM5P2-202ENST00000637225 1043 ntBASIC16.97■□□□□ 0.31
CLDN6P56747 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.97■□□□□ 0.31
CLDN6P56747 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN6P56747 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
CLDN6P56747 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN6P56747 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN6P56747 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CLDN6P56747 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN6P56747 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN6P56747 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.97■□□□□ 0.31
CLDN6P56747 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN6P56747 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN6P56747 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
CLDN6P56747 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN6P56747 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN6P56747 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.97■□□□□ 0.31
CLDN6P56747 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.96■□□□□ 0.31
CLDN6P56747 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLDN6P56747 ESPNP-201ENST00000270691 2015 ntBASIC16.96■□□□□ 0.31
CLDN6P56747 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLDN6P56747 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLDN6P56747 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLDN6P56747 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLDN6P56747 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLDN6P56747 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLDN6P56747 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLDN6P56747 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLDN6P56747 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLDN6P56747 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CLDN6P56747 FAM8A3P-201ENST00000427218 844 ntBASIC16.96■□□□□ 0.31
CLDN6P56747 AL645939.2-201ENST00000427340 991 ntBASIC16.96■□□□□ 0.31
CLDN6P56747 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CLDN6P56747 VN2R19P-201ENST00000442399 1052 ntBASIC16.96■□□□□ 0.31
CLDN6P56747 HCG4B-203ENST00000450128 991 ntBASIC16.96■□□□□ 0.31
CLDN6P56747 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.96■□□□□ 0.31
CLDN6P56747 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.96■□□□□ 0.31
CLDN6P56747 AP002472.1-201ENST00000577490 586 ntBASIC16.96■□□□□ 0.31
CLDN6P56747 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
CLDN6P56747 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.96■□□□□ 0.31
CLDN6P56747 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.96■□□□□ 0.31
CLDN6P56747 AC004706.3-202ENST00000621574 984 ntBASIC16.96■□□□□ 0.31
CLDN6P56747 C20orf181-201ENST00000623918 480 ntBASIC16.96■□□□□ 0.31
CLDN6P56747 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.96■□□□□ 0.31
CLDN6P56747 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CLDN6P56747 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
CLDN6P56747 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.96■□□□□ 0.31
CLDN6P56747 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
CLDN6P56747 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.3
CLDN6P56747 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.96■□□□□ 0.3
CLDN6P56747 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CLDN6P56747 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
CLDN6P56747 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.96■□□□□ 0.3
CLDN6P56747 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
CLDN6P56747 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CLDN6P56747 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN6P56747 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN6P56747 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN6P56747 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.95■□□□□ 0.3
CLDN6P56747 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CLDN6P56747 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CLDN6P56747 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN6P56747 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN6P56747 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN6P56747 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN6P56747 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.95■□□□□ 0.3
CLDN6P56747 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.95■□□□□ 0.3
CLDN6P56747 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN6P56747 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.95■□□□□ 0.3
CLDN6P56747 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.95■□□□□ 0.3
CLDN6P56747 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.95■□□□□ 0.3
CLDN6P56747 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN6P56747 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
CLDN6P56747 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.95■□□□□ 0.3
CLDN6P56747 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CLDN6P56747 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.95■□□□□ 0.3
CLDN6P56747 AL031432.2-201ENST00000566714 459 ntBASIC16.95■□□□□ 0.3
CLDN6P56747 AL928711.1-201ENST00000570165 459 ntBASIC16.95■□□□□ 0.3
CLDN6P56747 AC092364.2-202ENST00000597012 1073 ntBASIC16.95■□□□□ 0.3
CLDN6P56747 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.95■□□□□ 0.3
CLDN6P56747 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.95■□□□□ 0.3
CLDN6P56747 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.95■□□□□ 0.3
CLDN6P56747 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.95■□□□□ 0.3
CLDN6P56747 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.95■□□□□ 0.3
CLDN6P56747 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN6P56747 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN6P56747 AC020763.4-201ENST00000623414 4170 ntBASIC16.95■□□□□ 0.3
CLDN6P56747 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
CLDN6P56747 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN6P56747 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN6P56747 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN6P56747 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.95■□□□□ 0.3
CLDN6P56747 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CLDN6P56747 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN6P56747 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms