Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CDH6P55285 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDH6P55285 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDH6P55285 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CDH6P55285 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.46■□□□□ 0.55
CDH6P55285 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDH6P55285 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CDH6P55285 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CDH6P55285 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.46■□□□□ 0.55
CDH6P55285 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDH6P55285 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.46■□□□□ 0.55
CDH6P55285 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.46■□□□□ 0.55
CDH6P55285 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.46■□□□□ 0.55
CDH6P55285 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.46■□□□□ 0.55
CDH6P55285 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDH6P55285 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.46■□□□□ 0.55
CDH6P55285 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDH6P55285 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CDH6P55285 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CDH6P55285 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
CDH6P55285 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CDH6P55285 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDH6P55285 HLA-J-201ENST00000462773 1622 ntBASIC18.45■□□□□ 0.54
CDH6P55285 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CDH6P55285 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDH6P55285 AC139713.2-201ENST00000641328 2723 ntBASIC18.45■□□□□ 0.54
CDH6P55285 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.45■□□□□ 0.54
CDH6P55285 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDH6P55285 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDH6P55285 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CDH6P55285 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CDH6P55285 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDH6P55285 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDH6P55285 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CDH6P55285 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDH6P55285 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDH6P55285 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CDH6P55285 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.45■□□□□ 0.54
CDH6P55285 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.45■□□□□ 0.54
CDH6P55285 AC011498.5-201ENST00000592027 486 ntBASIC18.45■□□□□ 0.54
CDH6P55285 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.45■□□□□ 0.54
CDH6P55285 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CDH6P55285 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDH6P55285 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CDH6P55285 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CDH6P55285 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDH6P55285 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDH6P55285 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.45■□□□□ 0.54
CDH6P55285 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CDH6P55285 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDH6P55285 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDH6P55285 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDH6P55285 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CDH6P55285 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.44■□□□□ 0.54
CDH6P55285 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDH6P55285 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDH6P55285 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CDH6P55285 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDH6P55285 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDH6P55285 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.44■□□□□ 0.54
CDH6P55285 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDH6P55285 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDH6P55285 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CDH6P55285 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CDH6P55285 GUSBP12-201ENST00000513727 720 ntBASIC18.44■□□□□ 0.54
CDH6P55285 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.44■□□□□ 0.54
CDH6P55285 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.44■□□□□ 0.54
CDH6P55285 AC087388.1-201ENST00000571370 1112 ntBASIC18.44■□□□□ 0.54
CDH6P55285 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.44■□□□□ 0.54
CDH6P55285 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
CDH6P55285 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CDH6P55285 LINC01451-201ENST00000623792 534 ntBASIC18.44■□□□□ 0.54
CDH6P55285 AC141586.5-201ENST00000624546 2050 ntBASIC18.44■□□□□ 0.54
CDH6P55285 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CDH6P55285 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDH6P55285 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CDH6P55285 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDH6P55285 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CDH6P55285 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CDH6P55285 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CDH6P55285 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH6P55285 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.43■□□□□ 0.54
CDH6P55285 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.43■□□□□ 0.54
CDH6P55285 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.43■□□□□ 0.54
CDH6P55285 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH6P55285 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH6P55285 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CDH6P55285 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH6P55285 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CDH6P55285 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH6P55285 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH6P55285 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CDH6P55285 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.43■□□□□ 0.54
CDH6P55285 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.43■□□□□ 0.54
CDH6P55285 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH6P55285 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.43■□□□□ 0.54
CDH6P55285 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.43■□□□□ 0.54
CDH6P55285 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.43■□□□□ 0.54
CDH6P55285 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.43■□□□□ 0.54
CDH6P55285 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms