Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
LIMK2P53671 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LIMK2P53671 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LIMK2P53671 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.88■□□□□ 0.45
LIMK2P53671 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LIMK2P53671 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LIMK2P53671 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
LIMK2P53671 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.88■□□□□ 0.45
LIMK2P53671 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LIMK2P53671 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LIMK2P53671 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LIMK2P53671 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LIMK2P53671 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LIMK2P53671 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LIMK2P53671 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
LIMK2P53671 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
LIMK2P53671 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
LIMK2P53671 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.88■□□□□ 0.45
LIMK2P53671 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.88■□□□□ 0.45
LIMK2P53671 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.88■□□□□ 0.45
LIMK2P53671 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.88■□□□□ 0.45
LIMK2P53671 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.88■□□□□ 0.45
LIMK2P53671 AC012313.10-201ENST00000623509 926 ntBASIC17.88■□□□□ 0.45
LIMK2P53671 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LIMK2P53671 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LIMK2P53671 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LIMK2P53671 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.88■□□□□ 0.45
LIMK2P53671 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
LIMK2P53671 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.88■□□□□ 0.45
LIMK2P53671 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LIMK2P53671 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LIMK2P53671 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
LIMK2P53671 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.88■□□□□ 0.45
LIMK2P53671 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LIMK2P53671 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LIMK2P53671 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LIMK2P53671 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
LIMK2P53671 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
LIMK2P53671 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.87■□□□□ 0.45
LIMK2P53671 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LIMK2P53671 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LIMK2P53671 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LIMK2P53671 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.87■□□□□ 0.45
LIMK2P53671 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LIMK2P53671 AC080080.1-201ENST00000625121 2420 ntBASIC17.87■□□□□ 0.45
LIMK2P53671 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
LIMK2P53671 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
LIMK2P53671 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.87■□□□□ 0.45
LIMK2P53671 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.87■□□□□ 0.45
LIMK2P53671 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.87■□□□□ 0.45
LIMK2P53671 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LIMK2P53671 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.87■□□□□ 0.45
LIMK2P53671 TPM4P1-201ENST00000436100 807 ntBASIC17.87■□□□□ 0.45
LIMK2P53671 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LIMK2P53671 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.87■□□□□ 0.45
LIMK2P53671 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.87■□□□□ 0.45
LIMK2P53671 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.87■□□□□ 0.45
LIMK2P53671 MIR3652-201ENST00000579335 131 ntBASIC17.87■□□□□ 0.45
LIMK2P53671 MIR3180-1-201ENST00000580374 94 ntBASIC17.87■□□□□ 0.45
LIMK2P53671 MIR3180-3-201ENST00000584616 94 ntBASIC17.87■□□□□ 0.45
LIMK2P53671 AL691432.3-201ENST00000621860 400 ntBASIC17.87■□□□□ 0.45
LIMK2P53671 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.87■□□□□ 0.45
LIMK2P53671 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LIMK2P53671 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.87■□□□□ 0.45
LIMK2P53671 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.87■□□□□ 0.45
LIMK2P53671 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.87■□□□□ 0.45
LIMK2P53671 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
LIMK2P53671 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.87■□□□□ 0.45
LIMK2P53671 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
LIMK2P53671 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LIMK2P53671 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LIMK2P53671 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.87■□□□□ 0.45
LIMK2P53671 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
LIMK2P53671 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LIMK2P53671 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
LIMK2P53671 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LIMK2P53671 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
LIMK2P53671 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.86■□□□□ 0.45
LIMK2P53671 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
LIMK2P53671 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
LIMK2P53671 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
LIMK2P53671 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.86■□□□□ 0.45
LIMK2P53671 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LIMK2P53671 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LIMK2P53671 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
LIMK2P53671 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LIMK2P53671 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LIMK2P53671 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LIMK2P53671 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LIMK2P53671 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LIMK2P53671 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LIMK2P53671 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LIMK2P53671 AP002383.4-201ENST00000442518 975 ntBASIC17.86■□□□□ 0.45
LIMK2P53671 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.86■□□□□ 0.45
LIMK2P53671 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LIMK2P53671 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.86■□□□□ 0.45
LIMK2P53671 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.86■□□□□ 0.45
LIMK2P53671 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.86■□□□□ 0.45
LIMK2P53671 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.86■□□□□ 0.45
LIMK2P53671 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms