Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDX1P52945 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PDX1P52945 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PDX1P52945 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PDX1P52945 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PDX1P52945 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PDX1P52945 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PDX1P52945 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.21■□□□□ 0.35
PDX1P52945 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDX1P52945 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDX1P52945 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDX1P52945 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
PDX1P52945 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.21■□□□□ 0.35
PDX1P52945 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
PDX1P52945 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDX1P52945 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PDX1P52945 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDX1P52945 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PDX1P52945 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDX1P52945 RPS2P28-201ENST00000314255 741 ntBASIC17.21■□□□□ 0.35
PDX1P52945 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDX1P52945 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.21■□□□□ 0.35
PDX1P52945 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.21■□□□□ 0.35
PDX1P52945 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.21■□□□□ 0.35
PDX1P52945 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDX1P52945 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
PDX1P52945 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
PDX1P52945 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.21■□□□□ 0.35
PDX1P52945 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.21■□□□□ 0.35
PDX1P52945 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.21■□□□□ 0.35
PDX1P52945 AL356309.3-201ENST00000624132 1934 ntBASIC17.21■□□□□ 0.35
PDX1P52945 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDX1P52945 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.34
PDX1P52945 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
PDX1P52945 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
PDX1P52945 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDX1P52945 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.2■□□□□ 0.34
PDX1P52945 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
PDX1P52945 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
PDX1P52945 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
PDX1P52945 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDX1P52945 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.2■□□□□ 0.34
PDX1P52945 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDX1P52945 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
PDX1P52945 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDX1P52945 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PDX1P52945 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.2■□□□□ 0.34
PDX1P52945 AC092183.1-201ENST00000469884 875 ntBASIC17.2■□□□□ 0.34
PDX1P52945 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.2■□□□□ 0.34
PDX1P52945 AC034105.1-201ENST00000563488 319 ntBASIC17.2■□□□□ 0.34
PDX1P52945 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PDX1P52945 AL139288.1-201ENST00000623748 933 ntBASIC17.2■□□□□ 0.34
PDX1P52945 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDX1P52945 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDX1P52945 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDX1P52945 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PDX1P52945 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PDX1P52945 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.2■□□□□ 0.34
PDX1P52945 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDX1P52945 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDX1P52945 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PDX1P52945 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PDX1P52945 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDX1P52945 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PDX1P52945 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PDX1P52945 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.2■□□□□ 0.34
PDX1P52945 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDX1P52945 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PDX1P52945 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.19■□□□□ 0.34
PDX1P52945 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.19■□□□□ 0.34
PDX1P52945 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDX1P52945 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PDX1P52945 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDX1P52945 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PDX1P52945 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDX1P52945 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.19■□□□□ 0.34
PDX1P52945 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.19■□□□□ 0.34
PDX1P52945 HLA-J-201ENST00000462773 1622 ntBASIC17.19■□□□□ 0.34
PDX1P52945 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDX1P52945 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDX1P52945 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
PDX1P52945 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDX1P52945 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDX1P52945 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDX1P52945 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PDX1P52945 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PDX1P52945 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.19■□□□□ 0.34
PDX1P52945 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.19■□□□□ 0.34
PDX1P52945 AC098831.1-202ENST00000438821 336 ntBASIC17.19■□□□□ 0.34
PDX1P52945 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.19■□□□□ 0.34
PDX1P52945 AC112698.1-201ENST00000510299 916 ntBASIC17.19■□□□□ 0.34
PDX1P52945 OR7E14P-202ENST00000530490 1290 ntBASIC17.19■□□□□ 0.34
PDX1P52945 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDX1P52945 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.19■□□□□ 0.34
PDX1P52945 AC140113.2-201ENST00000604370 208 ntBASIC17.19■□□□□ 0.34
PDX1P52945 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.19■□□□□ 0.34
PDX1P52945 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDX1P52945 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.19■□□□□ 0.34
PDX1P52945 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
PDX1P52945 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms