Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.18■□□□□ 0.66
PDE6CP51160 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.18■□□□□ 0.66
PDE6CP51160 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19.18■□□□□ 0.66
PDE6CP51160 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
PDE6CP51160 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDE6CP51160 AL390719.2-201ENST00000606993 987 ntBASIC19.18■□□□□ 0.66
PDE6CP51160 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.18■□□□□ 0.66
PDE6CP51160 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.18■□□□□ 0.66
PDE6CP51160 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
PDE6CP51160 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC19.18■□□□□ 0.66
PDE6CP51160 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC19.18■□□□□ 0.66
PDE6CP51160 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
PDE6CP51160 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PDE6CP51160 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
PDE6CP51160 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
PDE6CP51160 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDE6CP51160 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PDE6CP51160 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PDE6CP51160 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDE6CP51160 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDE6CP51160 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDE6CP51160 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PDE6CP51160 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.17■□□□□ 0.66
PDE6CP51160 DRAXINP1-201ENST00000437611 948 ntBASIC19.17■□□□□ 0.66
PDE6CP51160 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC19.17■□□□□ 0.66
PDE6CP51160 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.17■□□□□ 0.66
PDE6CP51160 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.17■□□□□ 0.66
PDE6CP51160 RNF126P1-202ENST00000569893 925 ntBASIC19.17■□□□□ 0.66
PDE6CP51160 MIR3180-1-201ENST00000580374 94 ntBASIC19.17■□□□□ 0.66
PDE6CP51160 MIR3180-3-201ENST00000584616 94 ntBASIC19.17■□□□□ 0.66
PDE6CP51160 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.17■□□□□ 0.66
PDE6CP51160 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.17■□□□□ 0.66
PDE6CP51160 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PDE6CP51160 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDE6CP51160 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.17■□□□□ 0.66
PDE6CP51160 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDE6CP51160 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PDE6CP51160 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.17■□□□□ 0.66
PDE6CP51160 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDE6CP51160 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
PDE6CP51160 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.17■□□□□ 0.66
PDE6CP51160 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.17■□□□□ 0.66
PDE6CP51160 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDE6CP51160 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDE6CP51160 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.17■□□□□ 0.66
PDE6CP51160 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
PDE6CP51160 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
PDE6CP51160 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.16■□□□□ 0.66
PDE6CP51160 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDE6CP51160 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDE6CP51160 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
PDE6CP51160 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDE6CP51160 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDE6CP51160 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.16■□□□□ 0.66
PDE6CP51160 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDE6CP51160 IGHGP-201ENST00000390555 1178 ntBASIC19.16■□□□□ 0.66
PDE6CP51160 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDE6CP51160 TPM4P1-201ENST00000436100 807 ntBASIC19.16■□□□□ 0.66
PDE6CP51160 AP002383.4-201ENST00000442518 975 ntBASIC19.16■□□□□ 0.66
PDE6CP51160 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.16■□□□□ 0.66
PDE6CP51160 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PDE6CP51160 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.16■□□□□ 0.66
PDE6CP51160 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.16■□□□□ 0.66
PDE6CP51160 AC116407.2-201ENST00000613639 860 ntBASIC19.16■□□□□ 0.66
PDE6CP51160 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDE6CP51160 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDE6CP51160 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.16■□□□□ 0.66
PDE6CP51160 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.16■□□□□ 0.66
PDE6CP51160 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDE6CP51160 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDE6CP51160 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDE6CP51160 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDE6CP51160 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PDE6CP51160 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDE6CP51160 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDE6CP51160 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PDE6CP51160 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PDE6CP51160 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDE6CP51160 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
PDE6CP51160 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.15■□□□□ 0.66
PDE6CP51160 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDE6CP51160 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDE6CP51160 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.15■□□□□ 0.66
PDE6CP51160 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDE6CP51160 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.15■□□□□ 0.66
PDE6CP51160 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDE6CP51160 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.15■□□□□ 0.66
PDE6CP51160 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19.15■□□□□ 0.66
PDE6CP51160 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PDE6CP51160 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.15■□□□□ 0.66
PDE6CP51160 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.15■□□□□ 0.66
PDE6CP51160 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.15■□□□□ 0.66
PDE6CP51160 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDE6CP51160 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.15■□□□□ 0.66
PDE6CP51160 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
PDE6CP51160 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.15■□□□□ 0.66
PDE6CP51160 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.15■□□□□ 0.66
PDE6CP51160 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PDE6CP51160 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
PDE6CP51160 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms