Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SLC1A1P43005 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.57■□□□□ 0.56
SLC1A1P43005 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC1A1P43005 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC1A1P43005 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.57■□□□□ 0.56
SLC1A1P43005 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SLC1A1P43005 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SLC1A1P43005 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.57■□□□□ 0.56
SLC1A1P43005 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC1A1P43005 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC1A1P43005 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC1A1P43005 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SLC1A1P43005 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC1A1P43005 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC1A1P43005 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC1A1P43005 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC1A1P43005 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC1A1P43005 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC1A1P43005 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.56■□□□□ 0.56
SLC1A1P43005 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.56■□□□□ 0.56
SLC1A1P43005 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
SLC1A1P43005 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC1A1P43005 AC005332.3-201ENST00000589904 676 ntBASIC18.56■□□□□ 0.56
SLC1A1P43005 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.56■□□□□ 0.56
SLC1A1P43005 AC080080.1-201ENST00000625121 2420 ntBASIC18.56■□□□□ 0.56
SLC1A1P43005 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SLC1A1P43005 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC1A1P43005 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SLC1A1P43005 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
SLC1A1P43005 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
SLC1A1P43005 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
SLC1A1P43005 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.56■□□□□ 0.56
SLC1A1P43005 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.56■□□□□ 0.56
SLC1A1P43005 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC1A1P43005 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
SLC1A1P43005 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC1A1P43005 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
SLC1A1P43005 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC1A1P43005 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC1A1P43005 AC097374.2-201ENST00000618617 1306 ntBASIC18.55■□□□□ 0.56
SLC1A1P43005 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
SLC1A1P43005 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SLC1A1P43005 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC1A1P43005 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.55■□□□□ 0.56
SLC1A1P43005 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.55■□□□□ 0.56
SLC1A1P43005 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.55■□□□□ 0.56
SLC1A1P43005 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC1A1P43005 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC1A1P43005 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
SLC1A1P43005 KRT18P38-201ENST00000449496 1282 ntBASIC18.55■□□□□ 0.56
SLC1A1P43005 AL359075.1-203ENST00000462729 1002 ntBASIC18.55■□□□□ 0.56
SLC1A1P43005 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC1A1P43005 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.55■□□□□ 0.56
SLC1A1P43005 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.55■□□□□ 0.56
SLC1A1P43005 HYMAI.1-201ENST00000620949 238 ntBASIC18.55■□□□□ 0.56
SLC1A1P43005 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.55■□□□□ 0.56
SLC1A1P43005 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SLC1A1P43005 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC1A1P43005 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC1A1P43005 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.55■□□□□ 0.56
SLC1A1P43005 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
SLC1A1P43005 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.55■□□□□ 0.56
SLC1A1P43005 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC1A1P43005 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SLC1A1P43005 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SLC1A1P43005 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC1A1P43005 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC1A1P43005 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC1A1P43005 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SLC1A1P43005 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SLC1A1P43005 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC1A1P43005 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SLC1A1P43005 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC1A1P43005 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC1A1P43005 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.54■□□□□ 0.56
SLC1A1P43005 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC1A1P43005 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC1A1P43005 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC1A1P43005 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.54■□□□□ 0.56
SLC1A1P43005 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC1A1P43005 AL121761.2-201ENST00000598007 1648 ntBASIC18.54■□□□□ 0.56
SLC1A1P43005 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SLC1A1P43005 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
SLC1A1P43005 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC1A1P43005 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.54■□□□□ 0.56
SLC1A1P43005 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC1A1P43005 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC1A1P43005 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.54■□□□□ 0.56
SLC1A1P43005 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.54■□□□□ 0.56
SLC1A1P43005 AC112907.2-201ENST00000448639 330 ntBASIC18.54■□□□□ 0.56
SLC1A1P43005 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.54■□□□□ 0.56
SLC1A1P43005 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SLC1A1P43005 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.54■□□□□ 0.56
SLC1A1P43005 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SLC1A1P43005 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC1A1P43005 AL390719.2-201ENST00000606993 987 ntBASIC18.54■□□□□ 0.56
SLC1A1P43005 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC1A1P43005 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SLC1A1P43005 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
SLC1A1P43005 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms