Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
KRT20P35900 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
KRT20P35900 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
KRT20P35900 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.89■□□□□ 0.3
KRT20P35900 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
KRT20P35900 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
KRT20P35900 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
KRT20P35900 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KRT20P35900 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KRT20P35900 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
KRT20P35900 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KRT20P35900 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
KRT20P35900 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KRT20P35900 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
KRT20P35900 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KRT20P35900 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KRT20P35900 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KRT20P35900 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KRT20P35900 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.89■□□□□ 0.29
KRT20P35900 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.89■□□□□ 0.29
KRT20P35900 AC112907.2-201ENST00000448639 330 ntBASIC16.89■□□□□ 0.29
KRT20P35900 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.89■□□□□ 0.29
KRT20P35900 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.89■□□□□ 0.29
KRT20P35900 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.89■□□□□ 0.29
KRT20P35900 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.89■□□□□ 0.29
KRT20P35900 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.89■□□□□ 0.29
KRT20P35900 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.89■□□□□ 0.29
KRT20P35900 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
KRT20P35900 AL590326.2-201ENST00000625139 305 ntBASIC16.89■□□□□ 0.29
KRT20P35900 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
KRT20P35900 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
KRT20P35900 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
KRT20P35900 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.89■□□□□ 0.29
KRT20P35900 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KRT20P35900 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KRT20P35900 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
KRT20P35900 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
KRT20P35900 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
KRT20P35900 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
KRT20P35900 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KRT20P35900 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KRT20P35900 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.88■□□□□ 0.29
KRT20P35900 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KRT20P35900 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.88■□□□□ 0.29
KRT20P35900 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KRT20P35900 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KRT20P35900 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KRT20P35900 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
KRT20P35900 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.88■□□□□ 0.29
KRT20P35900 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KRT20P35900 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KRT20P35900 FLJ13224-201ENST00000313737 1514 ntBASIC16.88■□□□□ 0.29
KRT20P35900 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KRT20P35900 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KRT20P35900 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
KRT20P35900 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
KRT20P35900 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
KRT20P35900 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
KRT20P35900 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
KRT20P35900 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.88■□□□□ 0.29
KRT20P35900 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
KRT20P35900 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.88■□□□□ 0.29
KRT20P35900 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
KRT20P35900 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
KRT20P35900 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.88■□□□□ 0.29
KRT20P35900 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
KRT20P35900 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
KRT20P35900 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.88■□□□□ 0.29
KRT20P35900 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.88■□□□□ 0.29
KRT20P35900 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
KRT20P35900 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.88■□□□□ 0.29
KRT20P35900 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
KRT20P35900 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KRT20P35900 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KRT20P35900 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
KRT20P35900 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
KRT20P35900 AL356309.3-201ENST00000624132 1934 ntBASIC16.88■□□□□ 0.29
KRT20P35900 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KRT20P35900 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.87■□□□□ 0.29
KRT20P35900 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.87■□□□□ 0.29
KRT20P35900 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
KRT20P35900 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
KRT20P35900 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
KRT20P35900 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
KRT20P35900 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
KRT20P35900 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
KRT20P35900 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT20P35900 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.87■□□□□ 0.29
KRT20P35900 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
KRT20P35900 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
KRT20P35900 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT20P35900 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT20P35900 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
KRT20P35900 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.87■□□□□ 0.29
KRT20P35900 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
KRT20P35900 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
KRT20P35900 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
KRT20P35900 AL671277.2-201ENST00000458060 996 ntBASIC16.87■□□□□ 0.29
KRT20P35900 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.87■□□□□ 0.29
KRT20P35900 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms