Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.7■□□□□ 0.58
RFC1P35251 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.7■□□□□ 0.58
RFC1P35251 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RFC1P35251 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
RFC1P35251 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.7■□□□□ 0.58
RFC1P35251 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.7■□□□□ 0.58
RFC1P35251 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.7■□□□□ 0.58
RFC1P35251 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.7■□□□□ 0.58
RFC1P35251 AC087388.1-201ENST00000571370 1112 ntBASIC18.7■□□□□ 0.58
RFC1P35251 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.7■□□□□ 0.58
RFC1P35251 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RFC1P35251 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RFC1P35251 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.7■□□□□ 0.58
RFC1P35251 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
RFC1P35251 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RFC1P35251 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFC1P35251 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFC1P35251 REXO1L11P-201ENST00000620964 1927 ntBASIC18.7■□□□□ 0.58
RFC1P35251 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RFC1P35251 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFC1P35251 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFC1P35251 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.69■□□□□ 0.58
RFC1P35251 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFC1P35251 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
RFC1P35251 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFC1P35251 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
RFC1P35251 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RFC1P35251 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFC1P35251 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFC1P35251 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFC1P35251 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFC1P35251 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.69■□□□□ 0.58
RFC1P35251 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFC1P35251 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFC1P35251 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RFC1P35251 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RFC1P35251 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFC1P35251 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.69■□□□□ 0.58
RFC1P35251 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.69■□□□□ 0.58
RFC1P35251 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.69■□□□□ 0.58
RFC1P35251 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.69■□□□□ 0.58
RFC1P35251 GUSBP12-201ENST00000513727 720 ntBASIC18.69■□□□□ 0.58
RFC1P35251 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RFC1P35251 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.69■□□□□ 0.58
RFC1P35251 KRT8P26-201ENST00000534154 1276 ntBASIC18.69■□□□□ 0.58
RFC1P35251 AC116407.4-201ENST00000623319 1061 ntBASIC18.69■□□□□ 0.58
RFC1P35251 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFC1P35251 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
RFC1P35251 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFC1P35251 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFC1P35251 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFC1P35251 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
RFC1P35251 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RFC1P35251 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RFC1P35251 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFC1P35251 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.69■□□□□ 0.58
RFC1P35251 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.69■□□□□ 0.58
RFC1P35251 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFC1P35251 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFC1P35251 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.69■□□□□ 0.58
RFC1P35251 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.69■□□□□ 0.58
RFC1P35251 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RFC1P35251 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.68■□□□□ 0.58
RFC1P35251 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RFC1P35251 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RFC1P35251 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.68■□□□□ 0.58
RFC1P35251 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RFC1P35251 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RFC1P35251 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RFC1P35251 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.68■□□□□ 0.58
RFC1P35251 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RFC1P35251 PP12613-201ENST00000424958 2230 ntBASIC18.68■□□□□ 0.58
RFC1P35251 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RFC1P35251 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.68■□□□□ 0.58
RFC1P35251 DDX43P3-201ENST00000441064 443 ntBASIC18.68■□□□□ 0.58
RFC1P35251 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.68■□□□□ 0.58
RFC1P35251 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.68■□□□□ 0.58
RFC1P35251 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
RFC1P35251 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
RFC1P35251 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RFC1P35251 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
RFC1P35251 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
RFC1P35251 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RFC1P35251 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RFC1P35251 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RFC1P35251 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RFC1P35251 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RFC1P35251 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RFC1P35251 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RFC1P35251 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
RFC1P35251 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RFC1P35251 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RFC1P35251 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RFC1P35251 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
RFC1P35251 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.67■□□□□ 0.58
RFC1P35251 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RFC1P35251 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RFC1P35251 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
RFC1P35251 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RFC1P35251 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms