Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 MIR6821-201ENST00000617625 74 ntBASIC13.08□□□□□ -0.32
CKS2P33552 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC13.08□□□□□ -0.32
CKS2P33552 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC13.08□□□□□ -0.32
CKS2P33552 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC13.08□□□□□ -0.32
CKS2P33552 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CKS2P33552 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CKS2P33552 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
CKS2P33552 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CKS2P33552 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CKS2P33552 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CKS2P33552 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CKS2P33552 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CKS2P33552 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC13.08□□□□□ -0.32
CKS2P33552 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CKS2P33552 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CKS2P33552 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CKS2P33552 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CKS2P33552 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
CKS2P33552 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CKS2P33552 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC13.07□□□□□ -0.32
CKS2P33552 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
CKS2P33552 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC13.07□□□□□ -0.32
CKS2P33552 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CKS2P33552 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
CKS2P33552 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CKS2P33552 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CKS2P33552 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CKS2P33552 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CKS2P33552 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CKS2P33552 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CKS2P33552 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CKS2P33552 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC13.07□□□□□ -0.32
CKS2P33552 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC13.07□□□□□ -0.32
CKS2P33552 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CKS2P33552 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC13.07□□□□□ -0.32
CKS2P33552 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC13.07□□□□□ -0.32
CKS2P33552 RHEB-204ENST00000472642 900 ntTSL 3 BASIC13.07□□□□□ -0.32
CKS2P33552 THEM4-205ENST00000489410 643 ntTSL 2 BASIC13.07□□□□□ -0.32
CKS2P33552 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC13.07□□□□□ -0.32
CKS2P33552 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
CKS2P33552 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC13.07□□□□□ -0.32
CKS2P33552 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CKS2P33552 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC13.07□□□□□ -0.32
CKS2P33552 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC13.07□□□□□ -0.32
CKS2P33552 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CKS2P33552 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CKS2P33552 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CKS2P33552 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CKS2P33552 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CKS2P33552 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CKS2P33552 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC13.07□□□□□ -0.32
CKS2P33552 AGGF1P2-201ENST00000426656 2106 ntBASIC13.07□□□□□ -0.32
CKS2P33552 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CKS2P33552 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CKS2P33552 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CKS2P33552 AL163051.1-201ENST00000569214 1512 ntBASIC13.07□□□□□ -0.32
CKS2P33552 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CKS2P33552 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
CKS2P33552 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CKS2P33552 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CKS2P33552 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CKS2P33552 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CKS2P33552 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CKS2P33552 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
CKS2P33552 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC13.07□□□□□ -0.32
CKS2P33552 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CKS2P33552 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CKS2P33552 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CKS2P33552 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CKS2P33552 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CKS2P33552 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC13.06□□□□□ -0.32
CKS2P33552 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CKS2P33552 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
CKS2P33552 CES3-203ENST00000543856 3178 ntTSL 2 BASIC13.06□□□□□ -0.32
CKS2P33552 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CKS2P33552 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC13.06□□□□□ -0.32
CKS2P33552 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC13.06□□□□□ -0.32
CKS2P33552 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CKS2P33552 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC13.06□□□□□ -0.32
CKS2P33552 OS9-205ENST00000413095 1660 ntTSL 2 BASIC13.06□□□□□ -0.32
CKS2P33552 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CKS2P33552 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
CKS2P33552 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CKS2P33552 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC13.06□□□□□ -0.32
CKS2P33552 KIRREL3-AS3-201ENST00000404882 831 ntBASIC13.06□□□□□ -0.32
CKS2P33552 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC13.06□□□□□ -0.32
CKS2P33552 ELP6-205ENST00000439305 880 ntTSL 2 BASIC13.06□□□□□ -0.32
CKS2P33552 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC13.06□□□□□ -0.32
CKS2P33552 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CKS2P33552 OAS3-207ENST00000551007 998 ntTSL 2 BASIC13.06□□□□□ -0.32
CKS2P33552 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC13.06□□□□□ -0.32
CKS2P33552 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
CKS2P33552 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC13.06□□□□□ -0.32
CKS2P33552 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CKS2P33552 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CKS2P33552 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC13.06□□□□□ -0.32
CKS2P33552 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CKS2P33552 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CKS2P33552 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CKS2P33552 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms