Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC24.81■■□□□ 1.56
CPS1P31327 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC24.81■■□□□ 1.56
CPS1P31327 FUT8-AS1-201ENST00000621019 1521 ntBASIC24.81■■□□□ 1.56
CPS1P31327 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CPS1P31327 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CPS1P31327 CXCL1P1-201ENST00000502804 216 ntBASIC24.81■■□□□ 1.56
CPS1P31327 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC24.81■■□□□ 1.56
CPS1P31327 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC24.81■■□□□ 1.56
CPS1P31327 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC24.81■■□□□ 1.56
CPS1P31327 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC24.81■■□□□ 1.56
CPS1P31327 AL158211.3-201ENST00000607385 239 ntBASIC24.81■■□□□ 1.56
CPS1P31327 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC24.81■■□□□ 1.56
CPS1P31327 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC24.81■■□□□ 1.56
CPS1P31327 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CPS1P31327 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
CPS1P31327 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
CPS1P31327 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CPS1P31327 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
CPS1P31327 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CPS1P31327 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC24.81■■□□□ 1.56
CPS1P31327 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CPS1P31327 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC24.81■■□□□ 1.56
CPS1P31327 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
CPS1P31327 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC24.81■■□□□ 1.56
CPS1P31327 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC24.81■■□□□ 1.56
CPS1P31327 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CPS1P31327 AC126763.1-201ENST00000552015 2118 ntBASIC24.81■■□□□ 1.56
CPS1P31327 AC099522.2-201ENST00000607001 744 ntBASIC24.81■■□□□ 1.56
CPS1P31327 SRP9-204ENST00000619790 377 ntTSL 2 BASIC24.81■■□□□ 1.56
CPS1P31327 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
CPS1P31327 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CPS1P31327 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC24.8■■□□□ 1.56
CPS1P31327 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CPS1P31327 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CPS1P31327 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CPS1P31327 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
CPS1P31327 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CPS1P31327 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC24.8■■□□□ 1.56
CPS1P31327 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC24.8■■□□□ 1.56
CPS1P31327 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC24.8■■□□□ 1.56
CPS1P31327 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CPS1P31327 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC24.8■■□□□ 1.56
CPS1P31327 GPS2P2-201ENST00000430745 888 ntBASIC24.8■■□□□ 1.56
CPS1P31327 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC24.8■■□□□ 1.56
CPS1P31327 NKTR-203ENST00000442970 646 ntTSL 2 BASIC24.8■■□□□ 1.56
CPS1P31327 DUTP2-201ENST00000519164 463 ntBASIC24.8■■□□□ 1.56
CPS1P31327 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CPS1P31327 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
CPS1P31327 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC24.79■■□□□ 1.56
CPS1P31327 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CPS1P31327 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
CPS1P31327 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CPS1P31327 SIRPAP1-201ENST00000448467 1770 ntBASIC24.79■■□□□ 1.56
CPS1P31327 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC24.79■■□□□ 1.56
CPS1P31327 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC24.79■■□□□ 1.56
CPS1P31327 TREML5P-201ENST00000421694 576 ntBASIC24.79■■□□□ 1.56
CPS1P31327 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC24.79■■□□□ 1.56
CPS1P31327 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC24.79■■□□□ 1.56
CPS1P31327 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
CPS1P31327 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC24.79■■□□□ 1.56
CPS1P31327 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC24.79■■□□□ 1.56
CPS1P31327 TSFM-210ENST00000550559 897 ntTSL 5 BASIC24.79■■□□□ 1.56
CPS1P31327 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC24.79■■□□□ 1.56
CPS1P31327 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC24.79■■□□□ 1.56
CPS1P31327 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
CPS1P31327 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
CPS1P31327 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC24.79■■□□□ 1.56
CPS1P31327 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
CPS1P31327 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC24.79■■□□□ 1.56
CPS1P31327 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
CPS1P31327 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC24.79■■□□□ 1.56
CPS1P31327 AL049757.1-201ENST00000616842 1596 ntBASIC24.79■■□□□ 1.56
CPS1P31327 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CPS1P31327 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
CPS1P31327 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC24.78■■□□□ 1.56
CPS1P31327 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC24.78■■□□□ 1.56
CPS1P31327 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC24.78■■□□□ 1.56
CPS1P31327 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CPS1P31327 RPL30-202ENST00000396070 440 ntTSL 2 BASIC24.78■■□□□ 1.56
CPS1P31327 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC24.78■■□□□ 1.56
CPS1P31327 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC24.78■■□□□ 1.56
CPS1P31327 KRT8P48-201ENST00000515599 1220 ntBASIC24.78■■□□□ 1.56
CPS1P31327 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC24.78■■□□□ 1.56
CPS1P31327 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC24.78■■□□□ 1.56
CPS1P31327 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
CPS1P31327 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
CPS1P31327 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
CPS1P31327 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC24.78■■□□□ 1.56
CPS1P31327 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CPS1P31327 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
CPS1P31327 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC24.78■■□□□ 1.56
CPS1P31327 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC24.78■■□□□ 1.56
CPS1P31327 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC24.78■■□□□ 1.56
CPS1P31327 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC24.78■■□□□ 1.56
CPS1P31327 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
CPS1P31327 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC24.77■■□□□ 1.56
CPS1P31327 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
CPS1P31327 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CPS1P31327 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CPS1P31327 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms