Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC19.05■□□□□ 0.64
HOXD11P31277 BRIX1P1-201ENST00000521785 908 ntBASIC19.05■□□□□ 0.64
HOXD11P31277 B2M-202ENST00000544417 933 ntTSL 5 BASIC19.05■□□□□ 0.64
HOXD11P31277 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC19.05■□□□□ 0.64
HOXD11P31277 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC19.05■□□□□ 0.64
HOXD11P31277 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.05■□□□□ 0.64
HOXD11P31277 AL662884.1-201ENST00000559458 662 ntTSL 2 BASIC19.05■□□□□ 0.64
HOXD11P31277 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC19.05■□□□□ 0.64
HOXD11P31277 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC19.05■□□□□ 0.64
HOXD11P31277 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.05■□□□□ 0.64
HOXD11P31277 AC124283.3-201ENST00000570869 594 ntBASIC19.05■□□□□ 0.64
HOXD11P31277 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC19.05■□□□□ 0.64
HOXD11P31277 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC19.05■□□□□ 0.64
HOXD11P31277 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HOXD11P31277 NUDT7-207ENST00000613075 1073 ntTSL 3 BASIC19.05■□□□□ 0.64
HOXD11P31277 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
HOXD11P31277 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.05■□□□□ 0.64
HOXD11P31277 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HOXD11P31277 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC19.05■□□□□ 0.64
HOXD11P31277 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HOXD11P31277 Z98755.1-201ENST00000407015 1384 ntBASIC19.05■□□□□ 0.64
HOXD11P31277 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
HOXD11P31277 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
HOXD11P31277 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HOXD11P31277 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HOXD11P31277 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HOXD11P31277 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HOXD11P31277 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HOXD11P31277 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HOXD11P31277 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.04■□□□□ 0.64
HOXD11P31277 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HOXD11P31277 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC19.04■□□□□ 0.64
HOXD11P31277 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
HOXD11P31277 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
HOXD11P31277 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC19.04■□□□□ 0.64
HOXD11P31277 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC19.04■□□□□ 0.64
HOXD11P31277 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC19.04■□□□□ 0.64
HOXD11P31277 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
HOXD11P31277 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC19.04■□□□□ 0.64
HOXD11P31277 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
HOXD11P31277 AC023590.1-203ENST00000449065 411 ntTSL 3 BASIC19.04■□□□□ 0.64
HOXD11P31277 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC19.04■□□□□ 0.64
HOXD11P31277 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC19.04■□□□□ 0.64
HOXD11P31277 AC026117.1-201ENST00000509658 883 ntBASIC19.04■□□□□ 0.64
HOXD11P31277 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
HOXD11P31277 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC19.04■□□□□ 0.64
HOXD11P31277 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.04■□□□□ 0.64
HOXD11P31277 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.04■□□□□ 0.64
HOXD11P31277 DUX4L17-201ENST00000557360 1267 ntBASIC19.04■□□□□ 0.64
HOXD11P31277 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
HOXD11P31277 AP001063.1-201ENST00000568332 529 ntBASIC19.04■□□□□ 0.64
HOXD11P31277 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC19.04■□□□□ 0.64
HOXD11P31277 SNX6P1-201ENST00000601728 1224 ntBASIC19.04■□□□□ 0.64
HOXD11P31277 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HOXD11P31277 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.04■□□□□ 0.64
HOXD11P31277 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.04■□□□□ 0.64
HOXD11P31277 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.04■□□□□ 0.64
HOXD11P31277 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HOXD11P31277 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.03■□□□□ 0.64
HOXD11P31277 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HOXD11P31277 AL162741.1-201ENST00000565563 1558 ntBASIC19.03■□□□□ 0.64
HOXD11P31277 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.03■□□□□ 0.64
HOXD11P31277 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HOXD11P31277 APOC2-201ENST00000252490 727 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
HOXD11P31277 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HOXD11P31277 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HOXD11P31277 MS4A6E-201ENST00000300182 711 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HOXD11P31277 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
HOXD11P31277 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HOXD11P31277 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HOXD11P31277 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC19.03■□□□□ 0.64
HOXD11P31277 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HOXD11P31277 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.03■□□□□ 0.64
HOXD11P31277 AC007879.1-201ENST00000435643 554 ntTSL 4 BASIC19.03■□□□□ 0.64
HOXD11P31277 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC19.03■□□□□ 0.64
HOXD11P31277 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.03■□□□□ 0.64
HOXD11P31277 AC021146.8-201ENST00000507455 733 ntBASIC19.03■□□□□ 0.64
HOXD11P31277 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.03■□□□□ 0.64
HOXD11P31277 HMGN1P15-201ENST00000513870 295 ntBASIC19.03■□□□□ 0.64
HOXD11P31277 RN7SKP64-201ENST00000517206 328 ntBASIC19.03■□□□□ 0.64
HOXD11P31277 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC19.03■□□□□ 0.64
HOXD11P31277 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HOXD11P31277 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.03■□□□□ 0.64
HOXD11P31277 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.03■□□□□ 0.64
HOXD11P31277 GREM1-201ENST00000560677 623 ntTSL 4 BASIC19.03■□□□□ 0.64
HOXD11P31277 AC137735.1-201ENST00000581911 419 ntTSL 3 BASIC19.03■□□□□ 0.64
HOXD11P31277 RBM11P1-201ENST00000604951 799 ntBASIC19.03■□□□□ 0.64
HOXD11P31277 MIR7706-201ENST00000613747 67 ntBASIC19.03■□□□□ 0.64
HOXD11P31277 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HOXD11P31277 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
HOXD11P31277 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.03■□□□□ 0.64
HOXD11P31277 SERF2-217ENST00000630046 862 ntTSL 5 BASIC19.03■□□□□ 0.64
HOXD11P31277 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.03■□□□□ 0.64
HOXD11P31277 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
HOXD11P31277 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HOXD11P31277 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
HOXD11P31277 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HOXD11P31277 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HOXD11P31277 AC139530.1-201ENST00000575312 1977 ntBASIC19.02■□□□□ 0.64
HOXD11P31277 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms