Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN6P29350 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.84■□□□□ 0.29
PTPN6P29350 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN6P29350 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.84■□□□□ 0.29
PTPN6P29350 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN6P29350 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.84■□□□□ 0.29
PTPN6P29350 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.84■□□□□ 0.29
PTPN6P29350 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.84■□□□□ 0.29
PTPN6P29350 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.84■□□□□ 0.29
PTPN6P29350 AC083849.1-201ENST00000615227 514 ntBASIC16.84■□□□□ 0.29
PTPN6P29350 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.84■□□□□ 0.29
PTPN6P29350 AL121956.5-201ENST00000625261 221 ntBASIC16.84■□□□□ 0.29
PTPN6P29350 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN6P29350 LINC01311-201ENST00000565162 1445 ntBASIC16.84■□□□□ 0.29
PTPN6P29350 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN6P29350 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN6P29350 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN6P29350 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
PTPN6P29350 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.84■□□□□ 0.29
PTPN6P29350 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN6P29350 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN6P29350 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN6P29350 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN6P29350 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN6P29350 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTPN6P29350 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PTPN6P29350 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTPN6P29350 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTPN6P29350 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTPN6P29350 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.83■□□□□ 0.28
PTPN6P29350 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.83■□□□□ 0.28
PTPN6P29350 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PTPN6P29350 KRT18P65-201ENST00000439811 1286 ntBASIC16.83■□□□□ 0.28
PTPN6P29350 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTPN6P29350 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTPN6P29350 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.83■□□□□ 0.28
PTPN6P29350 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
PTPN6P29350 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.83■□□□□ 0.28
PTPN6P29350 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.83■□□□□ 0.28
PTPN6P29350 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
PTPN6P29350 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.83■□□□□ 0.28
PTPN6P29350 KRT89P-201ENST00000620027 1478 ntBASIC16.83■□□□□ 0.28
PTPN6P29350 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PTPN6P29350 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
PTPN6P29350 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTPN6P29350 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.82■□□□□ 0.28
PTPN6P29350 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN6P29350 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN6P29350 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN6P29350 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN6P29350 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN6P29350 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN6P29350 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN6P29350 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN6P29350 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.82■□□□□ 0.28
PTPN6P29350 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
PTPN6P29350 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.82■□□□□ 0.28
PTPN6P29350 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN6P29350 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
PTPN6P29350 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN6P29350 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.82■□□□□ 0.28
PTPN6P29350 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN6P29350 HBZP1-201ENST00000354915 429 ntBASIC16.82■□□□□ 0.28
PTPN6P29350 DDX43P3-201ENST00000441064 443 ntBASIC16.82■□□□□ 0.28
PTPN6P29350 AC092597.1-201ENST00000487352 616 ntBASIC16.82■□□□□ 0.28
PTPN6P29350 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.82■□□□□ 0.28
PTPN6P29350 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
PTPN6P29350 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.82■□□□□ 0.28
PTPN6P29350 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
PTPN6P29350 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
PTPN6P29350 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
PTPN6P29350 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN6P29350 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.82■□□□□ 0.28
PTPN6P29350 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN6P29350 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN6P29350 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN6P29350 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN6P29350 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.82■□□□□ 0.28
PTPN6P29350 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN6P29350 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN6P29350 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN6P29350 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN6P29350 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN6P29350 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN6P29350 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN6P29350 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN6P29350 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN6P29350 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.82■□□□□ 0.28
PTPN6P29350 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN6P29350 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.81■□□□□ 0.28
PTPN6P29350 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.81■□□□□ 0.28
PTPN6P29350 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PTPN6P29350 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PTPN6P29350 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PTPN6P29350 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
PTPN6P29350 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.81■□□□□ 0.28
PTPN6P29350 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTPN6P29350 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
PTPN6P29350 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PTPN6P29350 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms