Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
HTR1EP28566 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HTR1EP28566 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
HTR1EP28566 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
HTR1EP28566 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17■□□□□ 0.31
HTR1EP28566 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
HTR1EP28566 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HTR1EP28566 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HTR1EP28566 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HTR1EP28566 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
HTR1EP28566 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
HTR1EP28566 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HTR1EP28566 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
HTR1EP28566 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
HTR1EP28566 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
HTR1EP28566 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HTR1EP28566 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17■□□□□ 0.31
HTR1EP28566 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17■□□□□ 0.31
HTR1EP28566 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17■□□□□ 0.31
HTR1EP28566 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
HTR1EP28566 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17■□□□□ 0.31
HTR1EP28566 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17■□□□□ 0.31
HTR1EP28566 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17■□□□□ 0.31
HTR1EP28566 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17■□□□□ 0.31
HTR1EP28566 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17■□□□□ 0.31
HTR1EP28566 AC009065.1-201ENST00000564055 1225 ntBASIC17■□□□□ 0.31
HTR1EP28566 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HTR1EP28566 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17■□□□□ 0.31
HTR1EP28566 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17■□□□□ 0.31
HTR1EP28566 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17■□□□□ 0.31
HTR1EP28566 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
HTR1EP28566 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17■□□□□ 0.31
HTR1EP28566 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
HTR1EP28566 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17■□□□□ 0.31
HTR1EP28566 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HTR1EP28566 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17■□□□□ 0.31
HTR1EP28566 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17■□□□□ 0.31
HTR1EP28566 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HTR1EP28566 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HTR1EP28566 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HTR1EP28566 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.99■□□□□ 0.31
HTR1EP28566 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HTR1EP28566 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
HTR1EP28566 LINC00304-203ENST00000565008 1864 ntBASIC16.99■□□□□ 0.31
HTR1EP28566 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HTR1EP28566 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
HTR1EP28566 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HTR1EP28566 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HTR1EP28566 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.99■□□□□ 0.31
HTR1EP28566 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HTR1EP28566 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HTR1EP28566 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HTR1EP28566 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
HTR1EP28566 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HTR1EP28566 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.99■□□□□ 0.31
HTR1EP28566 KRT18P23-201ENST00000435622 1283 ntBASIC16.99■□□□□ 0.31
HTR1EP28566 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.99■□□□□ 0.31
HTR1EP28566 KRT18P38-201ENST00000449496 1282 ntBASIC16.99■□□□□ 0.31
HTR1EP28566 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HTR1EP28566 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.99■□□□□ 0.31
HTR1EP28566 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.99■□□□□ 0.31
HTR1EP28566 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.99■□□□□ 0.31
HTR1EP28566 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.99■□□□□ 0.31
HTR1EP28566 AL136038.3-201ENST00000561909 1096 ntBASIC16.99■□□□□ 0.31
HTR1EP28566 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.99■□□□□ 0.31
HTR1EP28566 MIR4674-201ENST00000582457 87 ntBASIC16.99■□□□□ 0.31
HTR1EP28566 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.99■□□□□ 0.31
HTR1EP28566 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.99■□□□□ 0.31
HTR1EP28566 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.99■□□□□ 0.31
HTR1EP28566 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.99■□□□□ 0.31
HTR1EP28566 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HTR1EP28566 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
HTR1EP28566 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.99■□□□□ 0.31
HTR1EP28566 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HTR1EP28566 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HTR1EP28566 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.99■□□□□ 0.31
HTR1EP28566 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
HTR1EP28566 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.99■□□□□ 0.31
HTR1EP28566 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HTR1EP28566 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.99■□□□□ 0.31
HTR1EP28566 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HTR1EP28566 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.99■□□□□ 0.31
HTR1EP28566 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HTR1EP28566 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HTR1EP28566 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HTR1EP28566 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HTR1EP28566 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.99■□□□□ 0.31
HTR1EP28566 AC100803.2-201ENST00000562459 1963 ntBASIC16.98■□□□□ 0.31
HTR1EP28566 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.98■□□□□ 0.31
HTR1EP28566 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
HTR1EP28566 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.98■□□□□ 0.31
HTR1EP28566 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
HTR1EP28566 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HTR1EP28566 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HTR1EP28566 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
HTR1EP28566 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
HTR1EP28566 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HTR1EP28566 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HTR1EP28566 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.98■□□□□ 0.31
HTR1EP28566 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms