Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
MMP11P24347 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.84■□□□□ 0.29
MMP11P24347 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MMP11P24347 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
MMP11P24347 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MMP11P24347 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MMP11P24347 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MMP11P24347 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MMP11P24347 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
MMP11P24347 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
MMP11P24347 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.84■□□□□ 0.29
MMP11P24347 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
MMP11P24347 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MMP11P24347 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MMP11P24347 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
MMP11P24347 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.84■□□□□ 0.29
MMP11P24347 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.84■□□□□ 0.29
MMP11P24347 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.84■□□□□ 0.29
MMP11P24347 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MMP11P24347 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MMP11P24347 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.84■□□□□ 0.29
MMP11P24347 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.84■□□□□ 0.29
MMP11P24347 AC106795.1-205ENST00000512851 1056 ntBASIC16.84■□□□□ 0.29
MMP11P24347 AL662844.1-201ENST00000546340 181 ntBASIC16.84■□□□□ 0.29
MMP11P24347 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.84■□□□□ 0.29
MMP11P24347 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.84■□□□□ 0.29
MMP11P24347 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.84■□□□□ 0.29
MMP11P24347 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.84■□□□□ 0.29
MMP11P24347 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MMP11P24347 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MMP11P24347 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MMP11P24347 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MMP11P24347 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.84■□□□□ 0.29
MMP11P24347 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
MMP11P24347 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MMP11P24347 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.84■□□□□ 0.29
MMP11P24347 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MMP11P24347 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MMP11P24347 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MMP11P24347 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
MMP11P24347 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
MMP11P24347 HCG11-201ENST00000411553 5696 ntBASIC16.83■□□□□ 0.29
MMP11P24347 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.83■□□□□ 0.29
MMP11P24347 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
MMP11P24347 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
MMP11P24347 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
MMP11P24347 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
MMP11P24347 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MMP11P24347 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MMP11P24347 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MMP11P24347 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MMP11P24347 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.83■□□□□ 0.28
MMP11P24347 FLJ13224-201ENST00000313737 1514 ntBASIC16.83■□□□□ 0.28
MMP11P24347 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MMP11P24347 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MMP11P24347 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MMP11P24347 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MMP11P24347 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
MMP11P24347 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.83■□□□□ 0.28
MMP11P24347 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.83■□□□□ 0.28
MMP11P24347 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.83■□□□□ 0.28
MMP11P24347 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.83■□□□□ 0.28
MMP11P24347 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.83■□□□□ 0.28
MMP11P24347 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MMP11P24347 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.83■□□□□ 0.28
MMP11P24347 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.83■□□□□ 0.28
MMP11P24347 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.83■□□□□ 0.28
MMP11P24347 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.83■□□□□ 0.28
MMP11P24347 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
MMP11P24347 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.83■□□□□ 0.28
MMP11P24347 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.83■□□□□ 0.28
MMP11P24347 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.83■□□□□ 0.28
MMP11P24347 TP73-AS1-210ENST00000637775 1455 ntBASIC16.83■□□□□ 0.28
MMP11P24347 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MMP11P24347 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
MMP11P24347 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
MMP11P24347 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
MMP11P24347 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
MMP11P24347 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.83■□□□□ 0.28
MMP11P24347 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.83■□□□□ 0.28
MMP11P24347 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MMP11P24347 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.83■□□□□ 0.28
MMP11P24347 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
MMP11P24347 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MMP11P24347 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.82■□□□□ 0.28
MMP11P24347 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MMP11P24347 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MMP11P24347 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.82■□□□□ 0.28
MMP11P24347 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.82■□□□□ 0.28
MMP11P24347 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
MMP11P24347 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MMP11P24347 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MMP11P24347 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
MMP11P24347 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MMP11P24347 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MMP11P24347 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MMP11P24347 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MMP11P24347 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MMP11P24347 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
MMP11P24347 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms