Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.89■□□□□ 0.45
XPAP23025 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.89■□□□□ 0.45
XPAP23025 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.89■□□□□ 0.45
XPAP23025 AC011467.2-201ENST00000598425 242 ntBASIC17.89■□□□□ 0.45
XPAP23025 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
XPAP23025 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.89■□□□□ 0.45
XPAP23025 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
XPAP23025 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
XPAP23025 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.89■□□□□ 0.45
XPAP23025 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.45
XPAP23025 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
XPAP23025 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
XPAP23025 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
XPAP23025 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
XPAP23025 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.89■□□□□ 0.45
XPAP23025 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
XPAP23025 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.89■□□□□ 0.45
XPAP23025 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.89■□□□□ 0.45
XPAP23025 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
XPAP23025 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
XPAP23025 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
XPAP23025 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.89■□□□□ 0.45
XPAP23025 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.89■□□□□ 0.45
XPAP23025 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
XPAP23025 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.88■□□□□ 0.45
XPAP23025 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
XPAP23025 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
XPAP23025 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.88■□□□□ 0.45
XPAP23025 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
XPAP23025 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
XPAP23025 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
XPAP23025 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.88■□□□□ 0.45
XPAP23025 AP000997.3-201ENST00000623333 2250 ntBASIC17.88■□□□□ 0.45
XPAP23025 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
XPAP23025 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
XPAP23025 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
XPAP23025 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
XPAP23025 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
XPAP23025 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
XPAP23025 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
XPAP23025 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
XPAP23025 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
XPAP23025 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
XPAP23025 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
XPAP23025 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
XPAP23025 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
XPAP23025 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.88■□□□□ 0.45
XPAP23025 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.88■□□□□ 0.45
XPAP23025 EMBP1-201ENST00000458200 901 ntBASIC17.88■□□□□ 0.45
XPAP23025 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
XPAP23025 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
XPAP23025 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.88■□□□□ 0.45
XPAP23025 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.88■□□□□ 0.45
XPAP23025 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.88■□□□□ 0.45
XPAP23025 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.88■□□□□ 0.45
XPAP23025 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.88■□□□□ 0.45
XPAP23025 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
XPAP23025 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.88■□□□□ 0.45
XPAP23025 AC097374.2-201ENST00000618617 1306 ntBASIC17.88■□□□□ 0.45
XPAP23025 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.88■□□□□ 0.45
XPAP23025 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
XPAP23025 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
XPAP23025 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
XPAP23025 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.88■□□□□ 0.45
XPAP23025 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.88■□□□□ 0.45
XPAP23025 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
XPAP23025 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
XPAP23025 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
XPAP23025 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.87■□□□□ 0.45
XPAP23025 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
XPAP23025 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.87■□□□□ 0.45
XPAP23025 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
XPAP23025 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
XPAP23025 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
XPAP23025 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
XPAP23025 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
XPAP23025 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.87■□□□□ 0.45
XPAP23025 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.87■□□□□ 0.45
XPAP23025 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.87■□□□□ 0.45
XPAP23025 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.87■□□□□ 0.45
XPAP23025 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
XPAP23025 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.87■□□□□ 0.45
XPAP23025 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.87■□□□□ 0.45
XPAP23025 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.87■□□□□ 0.45
XPAP23025 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
XPAP23025 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
XPAP23025 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
XPAP23025 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.87■□□□□ 0.45
XPAP23025 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
XPAP23025 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
XPAP23025 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
XPAP23025 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
XPAP23025 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
XPAP23025 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
XPAP23025 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.86■□□□□ 0.45
XPAP23025 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
XPAP23025 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.86■□□□□ 0.45
XPAP23025 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
XPAP23025 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.86■□□□□ 0.45
XPAP23025 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms