Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DPA1P20036 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DPA1P20036 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.92■□□□□ 0.46
HLA-DPA1P20036 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DPA1P20036 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DPA1P20036 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
HLA-DPA1P20036 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DPA1P20036 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.92■□□□□ 0.46
HLA-DPA1P20036 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.92■□□□□ 0.46
HLA-DPA1P20036 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DPA1P20036 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DPA1P20036 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.92■□□□□ 0.46
HLA-DPA1P20036 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
HLA-DPA1P20036 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DPA1P20036 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DPA1P20036 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DPA1P20036 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DPA1P20036 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DPA1P20036 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.91■□□□□ 0.46
HLA-DPA1P20036 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.91■□□□□ 0.46
HLA-DPA1P20036 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DPA1P20036 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DPA1P20036 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DPA1P20036 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
HLA-DPA1P20036 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.91■□□□□ 0.46
HLA-DPA1P20036 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DPA1P20036 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
HLA-DPA1P20036 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.91■□□□□ 0.46
HLA-DPA1P20036 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DPA1P20036 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DPA1P20036 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.91■□□□□ 0.46
HLA-DPA1P20036 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.91■□□□□ 0.46
HLA-DPA1P20036 LINC01451-201ENST00000623792 534 ntBASIC17.91■□□□□ 0.46
HLA-DPA1P20036 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DPA1P20036 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DPA1P20036 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DPA1P20036 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DPA1P20036 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
HLA-DPA1P20036 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
HLA-DPA1P20036 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DPA1P20036 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DPA1P20036 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.91■□□□□ 0.46
HLA-DPA1P20036 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
HLA-DPA1P20036 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.91■□□□□ 0.46
HLA-DPA1P20036 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DPA1P20036 LINC00896-202ENST00000609602 2128 ntBASIC17.9■□□□□ 0.46
HLA-DPA1P20036 PCDHB18P-201ENST00000524813 2368 ntBASIC17.9■□□□□ 0.46
HLA-DPA1P20036 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DPA1P20036 AC133963.1-201ENST00000504166 1679 ntBASIC17.9■□□□□ 0.46
HLA-DPA1P20036 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DPA1P20036 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DPA1P20036 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
HLA-DPA1P20036 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
HLA-DPA1P20036 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
HLA-DPA1P20036 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DPA1P20036 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.9■□□□□ 0.46
HLA-DPA1P20036 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DPA1P20036 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.9■□□□□ 0.46
HLA-DPA1P20036 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DPA1P20036 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.9■□□□□ 0.46
HLA-DPA1P20036 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.9■□□□□ 0.46
HLA-DPA1P20036 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.9■□□□□ 0.46
HLA-DPA1P20036 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DPA1P20036 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DPA1P20036 KRT18P1-202ENST00000452408 1331 ntBASIC17.9■□□□□ 0.46
HLA-DPA1P20036 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.9■□□□□ 0.46
HLA-DPA1P20036 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DPA1P20036 AL355312.1-201ENST00000407115 2176 ntBASIC17.9■□□□□ 0.46
HLA-DPA1P20036 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DPA1P20036 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
HLA-DPA1P20036 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DPA1P20036 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
HLA-DPA1P20036 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
HLA-DPA1P20036 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
HLA-DPA1P20036 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
HLA-DPA1P20036 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DPA1P20036 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DPA1P20036 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
HLA-DPA1P20036 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DPA1P20036 LINC00304-203ENST00000565008 1864 ntBASIC17.89■□□□□ 0.45
HLA-DPA1P20036 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.89■□□□□ 0.45
HLA-DPA1P20036 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DPA1P20036 DRAXINP1-201ENST00000437611 948 ntBASIC17.89■□□□□ 0.45
HLA-DPA1P20036 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DPA1P20036 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DPA1P20036 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.89■□□□□ 0.45
HLA-DPA1P20036 AC069148.1-201ENST00000608741 768 ntBASIC17.89■□□□□ 0.45
HLA-DPA1P20036 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DPA1P20036 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DPA1P20036 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.89■□□□□ 0.45
HLA-DPA1P20036 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.89■□□□□ 0.45
HLA-DPA1P20036 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DPA1P20036 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DPA1P20036 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
HLA-DPA1P20036 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DPA1P20036 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DPA1P20036 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DPA1P20036 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DPA1P20036 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DPA1P20036 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms