Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
XRCC1P18887 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
XRCC1P18887 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
XRCC1P18887 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
XRCC1P18887 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
XRCC1P18887 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
XRCC1P18887 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
XRCC1P18887 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
XRCC1P18887 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.7■□□□□ 0.42
XRCC1P18887 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
XRCC1P18887 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
XRCC1P18887 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.7■□□□□ 0.42
XRCC1P18887 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
XRCC1P18887 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
XRCC1P18887 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.7■□□□□ 0.42
XRCC1P18887 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.7■□□□□ 0.42
XRCC1P18887 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.7■□□□□ 0.42
XRCC1P18887 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.7■□□□□ 0.42
XRCC1P18887 AL592071.1-201ENST00000611956 408 ntBASIC17.7■□□□□ 0.42
XRCC1P18887 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.7■□□□□ 0.42
XRCC1P18887 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
XRCC1P18887 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
XRCC1P18887 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
XRCC1P18887 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
XRCC1P18887 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
XRCC1P18887 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
XRCC1P18887 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
XRCC1P18887 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
XRCC1P18887 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.69■□□□□ 0.42
XRCC1P18887 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
XRCC1P18887 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.69■□□□□ 0.42
XRCC1P18887 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
XRCC1P18887 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.69■□□□□ 0.42
XRCC1P18887 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
XRCC1P18887 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
XRCC1P18887 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
XRCC1P18887 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
XRCC1P18887 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.69■□□□□ 0.42
XRCC1P18887 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.69■□□□□ 0.42
XRCC1P18887 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
XRCC1P18887 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
XRCC1P18887 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
XRCC1P18887 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.69■□□□□ 0.42
XRCC1P18887 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.69■□□□□ 0.42
XRCC1P18887 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
XRCC1P18887 NUS1P1-201ENST00000446295 882 ntBASIC17.69■□□□□ 0.42
XRCC1P18887 TOB2P1-201ENST00000469761 992 ntBASIC17.69■□□□□ 0.42
XRCC1P18887 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.69■□□□□ 0.42
XRCC1P18887 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
XRCC1P18887 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.69■□□□□ 0.42
XRCC1P18887 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.69■□□□□ 0.42
XRCC1P18887 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
XRCC1P18887 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
XRCC1P18887 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
XRCC1P18887 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
XRCC1P18887 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
XRCC1P18887 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
XRCC1P18887 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
XRCC1P18887 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.69■□□□□ 0.42
XRCC1P18887 LINC01126-201ENST00000623515 1646 ntBASIC17.69■□□□□ 0.42
XRCC1P18887 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
XRCC1P18887 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
XRCC1P18887 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
XRCC1P18887 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
XRCC1P18887 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
XRCC1P18887 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
XRCC1P18887 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
XRCC1P18887 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
XRCC1P18887 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
XRCC1P18887 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
XRCC1P18887 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
XRCC1P18887 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
XRCC1P18887 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
XRCC1P18887 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
XRCC1P18887 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
XRCC1P18887 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
XRCC1P18887 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
XRCC1P18887 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.68■□□□□ 0.42
XRCC1P18887 LINC00265-3P-201ENST00000447588 903 ntBASIC17.68■□□□□ 0.42
XRCC1P18887 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
XRCC1P18887 AC012615.1-201ENST00000565797 1299 ntBASIC17.68■□□□□ 0.42
XRCC1P18887 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.68■□□□□ 0.42
XRCC1P18887 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.68■□□□□ 0.42
XRCC1P18887 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.68■□□□□ 0.42
XRCC1P18887 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
XRCC1P18887 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
XRCC1P18887 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
XRCC1P18887 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
XRCC1P18887 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
XRCC1P18887 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
XRCC1P18887 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.68■□□□□ 0.42
XRCC1P18887 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.68■□□□□ 0.42
XRCC1P18887 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
XRCC1P18887 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
XRCC1P18887 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
XRCC1P18887 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.67■□□□□ 0.42
XRCC1P18887 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.67■□□□□ 0.42
XRCC1P18887 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
XRCC1P18887 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
XRCC1P18887 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms