Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SMPD1P17405 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMPD1P17405 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
SMPD1P17405 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMPD1P17405 LINC00982-205ENST00000420957 435 ntBASIC19.63■□□□□ 0.73
SMPD1P17405 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC19.63■□□□□ 0.73
SMPD1P17405 HTR5BP-201ENST00000430851 1154 ntBASIC19.63■□□□□ 0.73
SMPD1P17405 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC19.63■□□□□ 0.73
SMPD1P17405 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMPD1P17405 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC19.63■□□□□ 0.73
SMPD1P17405 POLD4-207ENST00000531239 584 ntTSL 2 BASIC19.63■□□□□ 0.73
SMPD1P17405 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC19.63■□□□□ 0.73
SMPD1P17405 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC19.63■□□□□ 0.73
SMPD1P17405 AL078644.1-201ENST00000609881 752 ntBASIC19.63■□□□□ 0.73
SMPD1P17405 AC010654.1-201ENST00000615722 808 ntBASIC19.63■□□□□ 0.73
SMPD1P17405 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMPD1P17405 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMPD1P17405 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SMPD1P17405 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.63■□□□□ 0.73
SMPD1P17405 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.63■□□□□ 0.73
SMPD1P17405 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMPD1P17405 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMPD1P17405 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.62■□□□□ 0.73
SMPD1P17405 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMPD1P17405 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMPD1P17405 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMPD1P17405 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.62■□□□□ 0.73
SMPD1P17405 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMPD1P17405 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC19.62■□□□□ 0.73
SMPD1P17405 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMPD1P17405 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
SMPD1P17405 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMPD1P17405 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SMPD1P17405 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMPD1P17405 MRPL20P1-201ENST00000400819 433 ntBASIC19.62■□□□□ 0.73
SMPD1P17405 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SMPD1P17405 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC19.62■□□□□ 0.73
SMPD1P17405 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC19.62■□□□□ 0.73
SMPD1P17405 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC19.62■□□□□ 0.73
SMPD1P17405 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
SMPD1P17405 OR7E47P-204ENST00000575924 449 ntBASIC19.62■□□□□ 0.73
SMPD1P17405 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
SMPD1P17405 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMPD1P17405 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
SMPD1P17405 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.62■□□□□ 0.73
SMPD1P17405 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SMPD1P17405 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMPD1P17405 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMPD1P17405 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.62■□□□□ 0.73
SMPD1P17405 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMPD1P17405 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMPD1P17405 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.62■□□□□ 0.73
SMPD1P17405 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
SMPD1P17405 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMPD1P17405 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.62■□□□□ 0.73
SMPD1P17405 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMPD1P17405 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.61■□□□□ 0.73
SMPD1P17405 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMPD1P17405 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMPD1P17405 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
SMPD1P17405 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
SMPD1P17405 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SMPD1P17405 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SMPD1P17405 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
SMPD1P17405 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
SMPD1P17405 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMPD1P17405 CD82-202ENST00000342935 967 ntTSL 5 BASIC19.61■□□□□ 0.73
SMPD1P17405 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SMPD1P17405 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC19.61■□□□□ 0.73
SMPD1P17405 AC002558.1-201ENST00000488906 803 ntBASIC19.61■□□□□ 0.73
SMPD1P17405 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC19.61■□□□□ 0.73
SMPD1P17405 SNHG9-202ENST00000564014 471 ntBASIC19.61■□□□□ 0.73
SMPD1P17405 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC19.61■□□□□ 0.73
SMPD1P17405 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC19.61■□□□□ 0.73
SMPD1P17405 RPS15-207ENST00000591032 550 ntTSL 3 BASIC19.61■□□□□ 0.73
SMPD1P17405 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC19.61■□□□□ 0.73
SMPD1P17405 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC19.61■□□□□ 0.73
SMPD1P17405 AC010507.1-201ENST00000633895 436 ntBASIC19.61■□□□□ 0.73
SMPD1P17405 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.61■□□□□ 0.73
SMPD1P17405 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SMPD1P17405 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMPD1P17405 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SMPD1P17405 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.61■□□□□ 0.73
SMPD1P17405 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMPD1P17405 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.6■□□□□ 0.73
SMPD1P17405 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.6■□□□□ 0.73
SMPD1P17405 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.6■□□□□ 0.73
SMPD1P17405 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.6■□□□□ 0.73
SMPD1P17405 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
SMPD1P17405 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMPD1P17405 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMPD1P17405 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
SMPD1P17405 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
SMPD1P17405 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SMPD1P17405 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC19.6■□□□□ 0.73
SMPD1P17405 AP002414.1-201ENST00000391405 1147 ntBASIC19.6■□□□□ 0.73
SMPD1P17405 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
SMPD1P17405 AC254562.1-201ENST00000417586 456 ntBASIC19.6■□□□□ 0.73
SMPD1P17405 METTL21AP1-201ENST00000438852 635 ntBASIC19.6■□□□□ 0.73
SMPD1P17405 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms