Protein–RNA interactions for Protein: P14651

HOXB3, Homeobox protein Hox-B3, humanhuman

Predicted RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3P14651 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.37■□□□□ 0.37
HOXB3P14651 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.37■□□□□ 0.37
HOXB3P14651 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.37■□□□□ 0.37
HOXB3P14651 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.37■□□□□ 0.37
HOXB3P14651 AL132657.2-201ENST00000564417 358 ntBASIC17.37■□□□□ 0.37
HOXB3P14651 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.37■□□□□ 0.37
HOXB3P14651 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
HOXB3P14651 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.37■□□□□ 0.37
HOXB3P14651 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.37■□□□□ 0.37
HOXB3P14651 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.37■□□□□ 0.37
HOXB3P14651 FAM197Y3-203ENST00000618346 717 ntBASIC17.37■□□□□ 0.37
HOXB3P14651 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HOXB3P14651 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
HOXB3P14651 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HOXB3P14651 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
HOXB3P14651 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.37■□□□□ 0.37
HOXB3P14651 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HOXB3P14651 AC135050.7-201ENST00000624508 2218 ntBASIC17.36■□□□□ 0.37
HOXB3P14651 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HOXB3P14651 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.36■□□□□ 0.37
HOXB3P14651 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
HOXB3P14651 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HOXB3P14651 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HOXB3P14651 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HOXB3P14651 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.36■□□□□ 0.37
HOXB3P14651 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HOXB3P14651 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.36■□□□□ 0.37
HOXB3P14651 AC018712.1-201ENST00000455767 687 ntBASIC17.36■□□□□ 0.37
HOXB3P14651 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.36■□□□□ 0.37
HOXB3P14651 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.36■□□□□ 0.37
HOXB3P14651 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HOXB3P14651 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.36■□□□□ 0.37
HOXB3P14651 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
HOXB3P14651 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HOXB3P14651 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HOXB3P14651 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HOXB3P14651 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HOXB3P14651 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HOXB3P14651 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HOXB3P14651 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.36■□□□□ 0.37
HOXB3P14651 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.35■□□□□ 0.37
HOXB3P14651 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
HOXB3P14651 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
HOXB3P14651 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HOXB3P14651 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.35■□□□□ 0.37
HOXB3P14651 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.35■□□□□ 0.37
HOXB3P14651 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.35■□□□□ 0.37
HOXB3P14651 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.35■□□□□ 0.37
HOXB3P14651 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
HOXB3P14651 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
HOXB3P14651 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HOXB3P14651 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HOXB3P14651 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.35■□□□□ 0.37
HOXB3P14651 AL691447.1-201ENST00000419456 387 ntBASIC17.35■□□□□ 0.37
HOXB3P14651 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
HOXB3P14651 AL645939.2-201ENST00000427340 991 ntBASIC17.35■□□□□ 0.37
HOXB3P14651 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HOXB3P14651 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HOXB3P14651 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.35■□□□□ 0.37
HOXB3P14651 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC17.35■□□□□ 0.37
HOXB3P14651 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.35■□□□□ 0.37
HOXB3P14651 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.35■□□□□ 0.37
HOXB3P14651 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.35■□□□□ 0.37
HOXB3P14651 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.35■□□□□ 0.37
HOXB3P14651 AC048344.4-201ENST00000619744 527 ntBASIC17.35■□□□□ 0.37
HOXB3P14651 FAM215A-202ENST00000632077 792 ntBASIC17.35■□□□□ 0.37
HOXB3P14651 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HOXB3P14651 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
HOXB3P14651 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HOXB3P14651 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HOXB3P14651 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.35■□□□□ 0.37
HOXB3P14651 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
HOXB3P14651 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.35■□□□□ 0.37
HOXB3P14651 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HOXB3P14651 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HOXB3P14651 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HOXB3P14651 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HOXB3P14651 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
HOXB3P14651 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HOXB3P14651 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HOXB3P14651 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.34■□□□□ 0.37
HOXB3P14651 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HOXB3P14651 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.34■□□□□ 0.37
HOXB3P14651 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HOXB3P14651 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HOXB3P14651 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.34■□□□□ 0.37
HOXB3P14651 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HOXB3P14651 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HOXB3P14651 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HOXB3P14651 SMIM26-201ENST00000411646 505 ntAPPRIS P5 TSL 1 (best) BASIC17.34■□□□□ 0.37
HOXB3P14651 AL354751.1-201ENST00000412768 1863 ntBASIC17.34■□□□□ 0.37
HOXB3P14651 AC211486.1-202ENST00000416371 468 ntBASIC17.34■□□□□ 0.37
HOXB3P14651 SMIM26-202ENST00000435844 575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HOXB3P14651 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HOXB3P14651 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.34■□□□□ 0.37
HOXB3P14651 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
HOXB3P14651 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.34■□□□□ 0.37
HOXB3P14651 AC093010.1-201ENST00000473625 1624 ntBASIC17.34■□□□□ 0.37
HOXB3P14651 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
HOXB3P14651 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms