Protein–RNA interactions for Protein: P11229

CHRM1, Muscarinic acetylcholine receptor M1, humanhuman

Predicted RBP Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRM1P11229 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHRM1P11229 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.64■□□□□ 0.57
CHRM1P11229 AC099336.1-202ENST00000602961 463 ntBASIC18.64■□□□□ 0.57
CHRM1P11229 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHRM1P11229 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHRM1P11229 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHRM1P11229 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHRM1P11229 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHRM1P11229 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHRM1P11229 CROCCP3-202ENST00000420820 1947 ntBASIC18.64■□□□□ 0.57
CHRM1P11229 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CHRM1P11229 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHRM1P11229 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHRM1P11229 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.64■□□□□ 0.57
CHRM1P11229 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHRM1P11229 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHRM1P11229 NSUN5P1-202ENST00000421140 1535 ntBASIC18.64■□□□□ 0.57
CHRM1P11229 NSUN5P2-203ENST00000457352 1529 ntBASIC18.64■□□□□ 0.57
CHRM1P11229 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHRM1P11229 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.64■□□□□ 0.57
CHRM1P11229 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CHRM1P11229 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHRM1P11229 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.63■□□□□ 0.57
CHRM1P11229 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.63■□□□□ 0.57
CHRM1P11229 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.63■□□□□ 0.57
CHRM1P11229 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHRM1P11229 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CHRM1P11229 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CHRM1P11229 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CHRM1P11229 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.63■□□□□ 0.57
CHRM1P11229 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHRM1P11229 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHRM1P11229 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHRM1P11229 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC18.63■□□□□ 0.57
CHRM1P11229 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CHRM1P11229 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHRM1P11229 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHRM1P11229 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHRM1P11229 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC18.63■□□□□ 0.57
CHRM1P11229 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHRM1P11229 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CHRM1P11229 KRT8P2-201ENST00000556193 944 ntBASIC18.63■□□□□ 0.57
CHRM1P11229 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.63■□□□□ 0.57
CHRM1P11229 Z69720.1-201ENST00000601483 472 ntBASIC18.63■□□□□ 0.57
CHRM1P11229 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHRM1P11229 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CHRM1P11229 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.63■□□□□ 0.57
CHRM1P11229 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.63■□□□□ 0.57
CHRM1P11229 AC124864.1-201ENST00000623408 392 ntBASIC18.63■□□□□ 0.57
CHRM1P11229 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHRM1P11229 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.63■□□□□ 0.57
CHRM1P11229 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHRM1P11229 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHRM1P11229 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CHRM1P11229 AL163051.1-201ENST00000569214 1512 ntBASIC18.63■□□□□ 0.57
CHRM1P11229 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CHRM1P11229 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHRM1P11229 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHRM1P11229 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHRM1P11229 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.63■□□□□ 0.57
CHRM1P11229 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRM1P11229 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRM1P11229 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRM1P11229 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHRM1P11229 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRM1P11229 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHRM1P11229 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRM1P11229 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRM1P11229 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRM1P11229 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRM1P11229 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRM1P11229 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRM1P11229 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CHRM1P11229 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
CHRM1P11229 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.62■□□□□ 0.57
CHRM1P11229 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC18.62■□□□□ 0.57
CHRM1P11229 RNA5SP419-201ENST00000515908 135 ntBASIC18.62■□□□□ 0.57
CHRM1P11229 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.62■□□□□ 0.57
CHRM1P11229 AL121912.1-201ENST00000603683 238 ntBASIC18.62■□□□□ 0.57
CHRM1P11229 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRM1P11229 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.62■□□□□ 0.57
CHRM1P11229 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRM1P11229 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.62■□□□□ 0.57
CHRM1P11229 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CHRM1P11229 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CHRM1P11229 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.62■□□□□ 0.57
CHRM1P11229 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHRM1P11229 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CHRM1P11229 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.62■□□□□ 0.57
CHRM1P11229 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHRM1P11229 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRM1P11229 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.62■□□□□ 0.57
CHRM1P11229 AC005052.1-201ENST00000625181 2492 ntBASIC18.62■□□□□ 0.57
CHRM1P11229 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRM1P11229 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.61■□□□□ 0.57
CHRM1P11229 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC18.61■□□□□ 0.57
CHRM1P11229 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRM1P11229 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRM1P11229 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRM1P11229 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms