Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.71■□□□□ 0.27
RAB40ALP0C0E4 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.71■□□□□ 0.27
RAB40ALP0C0E4 AC006538.3-201ENST00000612495 578 ntBASIC16.71■□□□□ 0.27
RAB40ALP0C0E4 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAB40ALP0C0E4 ZNF259P1-201ENST00000407656 1365 ntBASIC16.71■□□□□ 0.27
RAB40ALP0C0E4 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.71■□□□□ 0.27
RAB40ALP0C0E4 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAB40ALP0C0E4 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAB40ALP0C0E4 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAB40ALP0C0E4 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAB40ALP0C0E4 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.71■□□□□ 0.27
RAB40ALP0C0E4 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.71■□□□□ 0.27
RAB40ALP0C0E4 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.71■□□□□ 0.27
RAB40ALP0C0E4 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAB40ALP0C0E4 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAB40ALP0C0E4 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
RAB40ALP0C0E4 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
RAB40ALP0C0E4 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
RAB40ALP0C0E4 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB40ALP0C0E4 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB40ALP0C0E4 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RAB40ALP0C0E4 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
RAB40ALP0C0E4 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.7■□□□□ 0.26
RAB40ALP0C0E4 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB40ALP0C0E4 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB40ALP0C0E4 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB40ALP0C0E4 PCDHB18P-201ENST00000524813 2368 ntBASIC16.7■□□□□ 0.26
RAB40ALP0C0E4 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB40ALP0C0E4 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB40ALP0C0E4 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.7■□□□□ 0.26
RAB40ALP0C0E4 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB40ALP0C0E4 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.7■□□□□ 0.26
RAB40ALP0C0E4 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB40ALP0C0E4 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RAB40ALP0C0E4 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB40ALP0C0E4 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB40ALP0C0E4 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RAB40ALP0C0E4 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.7■□□□□ 0.26
RAB40ALP0C0E4 RPS2P1-201ENST00000434010 821 ntBASIC16.7■□□□□ 0.26
RAB40ALP0C0E4 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.7■□□□□ 0.26
RAB40ALP0C0E4 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.7■□□□□ 0.26
RAB40ALP0C0E4 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
RAB40ALP0C0E4 NKAPP1-205ENST00000585790 367 ntBASIC16.7■□□□□ 0.26
RAB40ALP0C0E4 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.7■□□□□ 0.26
RAB40ALP0C0E4 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.7■□□□□ 0.26
RAB40ALP0C0E4 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB40ALP0C0E4 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB40ALP0C0E4 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.7■□□□□ 0.26
RAB40ALP0C0E4 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB40ALP0C0E4 HLA-J-201ENST00000462773 1622 ntBASIC16.7■□□□□ 0.26
RAB40ALP0C0E4 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB40ALP0C0E4 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.7■□□□□ 0.26
RAB40ALP0C0E4 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB40ALP0C0E4 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB40ALP0C0E4 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.69■□□□□ 0.26
RAB40ALP0C0E4 PHGDH-209ENST00000641074 1780 ntBASIC16.69■□□□□ 0.26
RAB40ALP0C0E4 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB40ALP0C0E4 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
RAB40ALP0C0E4 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB40ALP0C0E4 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.69■□□□□ 0.26
RAB40ALP0C0E4 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.69■□□□□ 0.26
RAB40ALP0C0E4 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.69■□□□□ 0.26
RAB40ALP0C0E4 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RAB40ALP0C0E4 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.69■□□□□ 0.26
RAB40ALP0C0E4 AC103564.2-201ENST00000432853 1299 ntBASIC16.69■□□□□ 0.26
RAB40ALP0C0E4 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.69■□□□□ 0.26
RAB40ALP0C0E4 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB40ALP0C0E4 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.69■□□□□ 0.26
RAB40ALP0C0E4 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.69■□□□□ 0.26
RAB40ALP0C0E4 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.69■□□□□ 0.26
RAB40ALP0C0E4 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.69■□□□□ 0.26
RAB40ALP0C0E4 AC025062.2-201ENST00000605477 670 ntBASIC16.69■□□□□ 0.26
RAB40ALP0C0E4 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
RAB40ALP0C0E4 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
RAB40ALP0C0E4 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.69■□□□□ 0.26
RAB40ALP0C0E4 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB40ALP0C0E4 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB40ALP0C0E4 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB40ALP0C0E4 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.69■□□□□ 0.26
RAB40ALP0C0E4 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB40ALP0C0E4 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.69■□□□□ 0.26
RAB40ALP0C0E4 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.69■□□□□ 0.26
RAB40ALP0C0E4 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.69■□□□□ 0.26
RAB40ALP0C0E4 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RAB40ALP0C0E4 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
RAB40ALP0C0E4 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB40ALP0C0E4 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RAB40ALP0C0E4 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RAB40ALP0C0E4 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RAB40ALP0C0E4 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RAB40ALP0C0E4 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB40ALP0C0E4 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB40ALP0C0E4 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
RAB40ALP0C0E4 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RAB40ALP0C0E4 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
RAB40ALP0C0E4 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RAB40ALP0C0E4 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RAB40ALP0C0E4 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
RAB40ALP0C0E4 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.68■□□□□ 0.26
RAB40ALP0C0E4 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms