Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
KRT6AP02538 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
KRT6AP02538 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.21■□□□□ 0.35
KRT6AP02538 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.21■□□□□ 0.35
KRT6AP02538 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
KRT6AP02538 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
KRT6AP02538 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KRT6AP02538 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.21■□□□□ 0.35
KRT6AP02538 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.21■□□□□ 0.35
KRT6AP02538 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
KRT6AP02538 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
KRT6AP02538 AL023806.1-201ENST00000603994 1649 ntBASIC17.21■□□□□ 0.35
KRT6AP02538 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KRT6AP02538 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
KRT6AP02538 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
KRT6AP02538 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
KRT6AP02538 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
KRT6AP02538 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
KRT6AP02538 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
KRT6AP02538 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
KRT6AP02538 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
KRT6AP02538 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
KRT6AP02538 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KRT6AP02538 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
KRT6AP02538 ZNF444P1-201ENST00000559497 298 ntBASIC17.2■□□□□ 0.34
KRT6AP02538 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.2■□□□□ 0.34
KRT6AP02538 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.2■□□□□ 0.34
KRT6AP02538 AC141586.5-201ENST00000624546 2050 ntBASIC17.2■□□□□ 0.34
KRT6AP02538 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KRT6AP02538 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
KRT6AP02538 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KRT6AP02538 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.2■□□□□ 0.34
KRT6AP02538 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
KRT6AP02538 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
KRT6AP02538 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT6AP02538 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT6AP02538 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT6AP02538 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT6AP02538 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
KRT6AP02538 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.19■□□□□ 0.34
KRT6AP02538 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT6AP02538 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT6AP02538 KRT8P47-201ENST00000604727 1398 ntBASIC17.19■□□□□ 0.34
KRT6AP02538 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
KRT6AP02538 PP12613-201ENST00000424958 2230 ntBASIC17.19■□□□□ 0.34
KRT6AP02538 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT6AP02538 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT6AP02538 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT6AP02538 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
KRT6AP02538 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
KRT6AP02538 HOMER2P1-201ENST00000455653 964 ntBASIC17.19■□□□□ 0.34
KRT6AP02538 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.19■□□□□ 0.34
KRT6AP02538 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
KRT6AP02538 AP003733.1-201ENST00000491725 852 ntBASIC17.19■□□□□ 0.34
KRT6AP02538 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.19■□□□□ 0.34
KRT6AP02538 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.19■□□□□ 0.34
KRT6AP02538 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT6AP02538 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.19■□□□□ 0.34
KRT6AP02538 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT6AP02538 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT6AP02538 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT6AP02538 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT6AP02538 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
KRT6AP02538 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
KRT6AP02538 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
KRT6AP02538 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
KRT6AP02538 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
KRT6AP02538 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KRT6AP02538 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
KRT6AP02538 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
KRT6AP02538 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KRT6AP02538 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.18■□□□□ 0.34
KRT6AP02538 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
KRT6AP02538 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KRT6AP02538 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KRT6AP02538 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KRT6AP02538 AC117947.1-201ENST00000427448 529 ntBASIC17.18■□□□□ 0.34
KRT6AP02538 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KRT6AP02538 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.18■□□□□ 0.34
KRT6AP02538 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KRT6AP02538 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
KRT6AP02538 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
KRT6AP02538 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
KRT6AP02538 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.18■□□□□ 0.34
KRT6AP02538 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.18■□□□□ 0.34
KRT6AP02538 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.18■□□□□ 0.34
KRT6AP02538 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
KRT6AP02538 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.18■□□□□ 0.34
KRT6AP02538 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.18■□□□□ 0.34
KRT6AP02538 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.18■□□□□ 0.34
KRT6AP02538 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KRT6AP02538 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
KRT6AP02538 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
KRT6AP02538 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KRT6AP02538 AC073508.3-201ENST00000619697 1419 ntBASIC17.18■□□□□ 0.34
KRT6AP02538 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
KRT6AP02538 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
KRT6AP02538 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KRT6AP02538 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.18■□□□□ 0.34
KRT6AP02538 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms