Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
TRUB2O95900 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.58■□□□□ 0.56
TRUB2O95900 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.58■□□□□ 0.56
TRUB2O95900 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.58■□□□□ 0.56
TRUB2O95900 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
TRUB2O95900 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
TRUB2O95900 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.58■□□□□ 0.56
TRUB2O95900 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRUB2O95900 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRUB2O95900 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.57■□□□□ 0.56
TRUB2O95900 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRUB2O95900 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRUB2O95900 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRUB2O95900 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.57■□□□□ 0.56
TRUB2O95900 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRUB2O95900 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.57■□□□□ 0.56
TRUB2O95900 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.57■□□□□ 0.56
TRUB2O95900 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRUB2O95900 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRUB2O95900 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.57■□□□□ 0.56
TRUB2O95900 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRUB2O95900 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRUB2O95900 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
TRUB2O95900 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.57■□□□□ 0.56
TRUB2O95900 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
TRUB2O95900 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.57■□□□□ 0.56
TRUB2O95900 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.57■□□□□ 0.56
TRUB2O95900 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.57■□□□□ 0.56
TRUB2O95900 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.57■□□□□ 0.56
TRUB2O95900 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.57■□□□□ 0.56
TRUB2O95900 AC099336.1-202ENST00000602961 463 ntBASIC18.57■□□□□ 0.56
TRUB2O95900 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.57■□□□□ 0.56
TRUB2O95900 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.57■□□□□ 0.56
TRUB2O95900 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRUB2O95900 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.57■□□□□ 0.56
TRUB2O95900 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRUB2O95900 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.57■□□□□ 0.56
TRUB2O95900 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
TRUB2O95900 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRUB2O95900 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRUB2O95900 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRUB2O95900 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.56■□□□□ 0.56
TRUB2O95900 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRUB2O95900 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
TRUB2O95900 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.56■□□□□ 0.56
TRUB2O95900 LINC00304-203ENST00000565008 1864 ntBASIC18.56■□□□□ 0.56
TRUB2O95900 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRUB2O95900 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRUB2O95900 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.56■□□□□ 0.56
TRUB2O95900 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.56■□□□□ 0.56
TRUB2O95900 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.56■□□□□ 0.56
TRUB2O95900 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRUB2O95900 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRUB2O95900 AC097374.2-201ENST00000618617 1306 ntBASIC18.56■□□□□ 0.56
TRUB2O95900 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
TRUB2O95900 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRUB2O95900 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRUB2O95900 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRUB2O95900 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRUB2O95900 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.56■□□□□ 0.56
TRUB2O95900 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
TRUB2O95900 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRUB2O95900 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRUB2O95900 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
TRUB2O95900 AC096633.1-201ENST00000422446 749 ntBASIC18.56■□□□□ 0.56
TRUB2O95900 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.56■□□□□ 0.56
TRUB2O95900 BNIP3P18-201ENST00000593976 575 ntBASIC18.56■□□□□ 0.56
TRUB2O95900 CLEC4GP1-201ENST00000596555 870 ntBASIC18.56■□□□□ 0.56
TRUB2O95900 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.56■□□□□ 0.56
TRUB2O95900 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRUB2O95900 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
TRUB2O95900 REXO1L11P-201ENST00000620964 1927 ntBASIC18.56■□□□□ 0.56
TRUB2O95900 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRUB2O95900 AC133963.1-201ENST00000504166 1679 ntBASIC18.56■□□□□ 0.56
TRUB2O95900 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.56■□□□□ 0.56
TRUB2O95900 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRUB2O95900 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.56■□□□□ 0.56
TRUB2O95900 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.55■□□□□ 0.56
TRUB2O95900 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
TRUB2O95900 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRUB2O95900 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRUB2O95900 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRUB2O95900 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.55■□□□□ 0.56
TRUB2O95900 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
TRUB2O95900 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRUB2O95900 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRUB2O95900 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.55■□□□□ 0.56
TRUB2O95900 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRUB2O95900 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRUB2O95900 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.55■□□□□ 0.56
TRUB2O95900 NUS1P1-201ENST00000446295 882 ntBASIC18.55■□□□□ 0.56
TRUB2O95900 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.55■□□□□ 0.56
TRUB2O95900 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.55■□□□□ 0.56
TRUB2O95900 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.55■□□□□ 0.56
TRUB2O95900 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.55■□□□□ 0.56
TRUB2O95900 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.55■□□□□ 0.56
TRUB2O95900 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.55■□□□□ 0.56
TRUB2O95900 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRUB2O95900 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRUB2O95900 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms