Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AL022342.1-201ENST00000400363 863 ntBASIC15.77■□□□□ 0.12
CNOT4O95628 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.77■□□□□ 0.12
CNOT4O95628 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.77■□□□□ 0.12
CNOT4O95628 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.77■□□□□ 0.12
CNOT4O95628 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC15.77■□□□□ 0.12
CNOT4O95628 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.77■□□□□ 0.12
CNOT4O95628 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.12
CNOT4O95628 FICD-205ENST00000552758 603 ntTSL 2 BASIC15.77■□□□□ 0.12
CNOT4O95628 TPM1-218ENST00000559281 851 ntTSL 5 BASIC15.77■□□□□ 0.12
CNOT4O95628 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC15.77■□□□□ 0.12
CNOT4O95628 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.77■□□□□ 0.12
CNOT4O95628 AL732292.2-201ENST00000609649 430 ntBASIC15.77■□□□□ 0.12
CNOT4O95628 AC114341.1-201ENST00000618070 349 ntBASIC15.77■□□□□ 0.12
CNOT4O95628 AL031008.1-201ENST00000619963 541 ntBASIC15.77■□□□□ 0.12
CNOT4O95628 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.77■□□□□ 0.12
CNOT4O95628 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
CNOT4O95628 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CNOT4O95628 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CNOT4O95628 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC15.77■□□□□ 0.11
CNOT4O95628 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
CNOT4O95628 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CNOT4O95628 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.77■□□□□ 0.11
CNOT4O95628 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
CNOT4O95628 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC15.77■□□□□ 0.11
CNOT4O95628 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CNOT4O95628 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CNOT4O95628 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC15.77■□□□□ 0.11
CNOT4O95628 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CNOT4O95628 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
CNOT4O95628 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
CNOT4O95628 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CNOT4O95628 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CNOT4O95628 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CNOT4O95628 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC15.77■□□□□ 0.11
CNOT4O95628 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CNOT4O95628 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CNOT4O95628 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CNOT4O95628 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CNOT4O95628 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CNOT4O95628 AC135776.1-201ENST00000319817 2481 ntBASIC15.76■□□□□ 0.11
CNOT4O95628 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CNOT4O95628 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CNOT4O95628 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CNOT4O95628 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CNOT4O95628 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CNOT4O95628 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC15.76■□□□□ 0.11
CNOT4O95628 OR6D1P-203ENST00000641209 4860 ntBASIC15.76■□□□□ 0.11
CNOT4O95628 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
CNOT4O95628 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CNOT4O95628 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CNOT4O95628 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
CNOT4O95628 AC096633.1-201ENST00000422446 749 ntBASIC15.76■□□□□ 0.11
CNOT4O95628 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC15.76■□□□□ 0.11
CNOT4O95628 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC15.76■□□□□ 0.11
CNOT4O95628 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.76■□□□□ 0.11
CNOT4O95628 AL160237.2-201ENST00000556165 472 ntBASIC15.76■□□□□ 0.11
CNOT4O95628 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.76■□□□□ 0.11
CNOT4O95628 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.76■□□□□ 0.11
CNOT4O95628 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC15.76■□□□□ 0.11
CNOT4O95628 AC005336.2-201ENST00000593183 939 ntBASIC15.76■□□□□ 0.11
CNOT4O95628 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CNOT4O95628 AC116407.2-201ENST00000613639 860 ntBASIC15.76■□□□□ 0.11
CNOT4O95628 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CNOT4O95628 EFTUD1P1-204ENST00000560401 1798 ntBASIC15.76■□□□□ 0.11
CNOT4O95628 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CNOT4O95628 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CNOT4O95628 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC15.76■□□□□ 0.11
CNOT4O95628 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC15.76■□□□□ 0.11
CNOT4O95628 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CNOT4O95628 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CNOT4O95628 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC15.76■□□□□ 0.11
CNOT4O95628 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC15.76■□□□□ 0.11
CNOT4O95628 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC15.76■□□□□ 0.11
CNOT4O95628 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CNOT4O95628 LTB4R2-202ENST00000528054 3092 ntBASIC15.76■□□□□ 0.11
CNOT4O95628 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CNOT4O95628 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CNOT4O95628 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC15.75■□□□□ 0.11
CNOT4O95628 AL390961.4-201ENST00000623958 2535 ntBASIC15.75■□□□□ 0.11
CNOT4O95628 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CNOT4O95628 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CNOT4O95628 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CNOT4O95628 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CNOT4O95628 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CNOT4O95628 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CNOT4O95628 COMP-202ENST00000425807 2292 ntTSL 2 BASIC15.75■□□□□ 0.11
CNOT4O95628 PODN-203ENST00000395871 2744 ntTSL 5 BASIC15.75■□□□□ 0.11
CNOT4O95628 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CNOT4O95628 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC15.75■□□□□ 0.11
CNOT4O95628 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CNOT4O95628 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC15.75■□□□□ 0.11
CNOT4O95628 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CNOT4O95628 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CNOT4O95628 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CNOT4O95628 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
CNOT4O95628 TBC1D3P5-201ENST00000579401 1545 ntBASIC15.75■□□□□ 0.11
CNOT4O95628 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC15.75■□□□□ 0.11
CNOT4O95628 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CNOT4O95628 SP100-208ENST00000427101 1922 ntTSL 2 BASIC15.75■□□□□ 0.11
CNOT4O95628 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms