Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.59■□□□□ 0.57
BEST1O76090 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.59■□□□□ 0.57
BEST1O76090 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.59■□□□□ 0.57
BEST1O76090 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.59■□□□□ 0.57
BEST1O76090 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
BEST1O76090 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.59■□□□□ 0.57
BEST1O76090 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BEST1O76090 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
BEST1O76090 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BEST1O76090 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.59■□□□□ 0.57
BEST1O76090 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.59■□□□□ 0.57
BEST1O76090 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
BEST1O76090 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
BEST1O76090 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.58■□□□□ 0.57
BEST1O76090 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
BEST1O76090 AC068880.1-201ENST00000507289 2297 ntBASIC18.58■□□□□ 0.57
BEST1O76090 AC132938.5-201ENST00000624980 1813 ntBASIC18.58■□□□□ 0.57
BEST1O76090 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
BEST1O76090 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
BEST1O76090 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
BEST1O76090 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
BEST1O76090 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.58■□□□□ 0.57
BEST1O76090 AC004817.3-201ENST00000602957 2129 ntBASIC18.58■□□□□ 0.57
BEST1O76090 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
BEST1O76090 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.58■□□□□ 0.57
BEST1O76090 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.58■□□□□ 0.57
BEST1O76090 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
BEST1O76090 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.56
BEST1O76090 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
BEST1O76090 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
BEST1O76090 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.58■□□□□ 0.56
BEST1O76090 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.58■□□□□ 0.56
BEST1O76090 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
BEST1O76090 SART3-203ENST00000546611 1184 ntBASIC18.58■□□□□ 0.56
BEST1O76090 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.58■□□□□ 0.56
BEST1O76090 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
BEST1O76090 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.58■□□□□ 0.56
BEST1O76090 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
BEST1O76090 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
BEST1O76090 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
BEST1O76090 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
BEST1O76090 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.58■□□□□ 0.56
BEST1O76090 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.58■□□□□ 0.56
BEST1O76090 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
BEST1O76090 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
BEST1O76090 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
BEST1O76090 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
BEST1O76090 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.57■□□□□ 0.56
BEST1O76090 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
BEST1O76090 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.57■□□□□ 0.56
BEST1O76090 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
BEST1O76090 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.57■□□□□ 0.56
BEST1O76090 AC134043.2-201ENST00000624206 2238 ntBASIC18.57■□□□□ 0.56
BEST1O76090 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BEST1O76090 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BEST1O76090 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
BEST1O76090 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
BEST1O76090 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BEST1O76090 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.57■□□□□ 0.56
BEST1O76090 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.57■□□□□ 0.56
BEST1O76090 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.57■□□□□ 0.56
BEST1O76090 SLC25A6P4-201ENST00000586535 553 ntBASIC18.57■□□□□ 0.56
BEST1O76090 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.57■□□□□ 0.56
BEST1O76090 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.57■□□□□ 0.56
BEST1O76090 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
BEST1O76090 AC148477.8-201ENST00000624298 468 ntBASIC18.57■□□□□ 0.56
BEST1O76090 AC073592.5-201ENST00000624854 528 ntBASIC18.57■□□□□ 0.56
BEST1O76090 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
BEST1O76090 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.57■□□□□ 0.56
BEST1O76090 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BEST1O76090 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
BEST1O76090 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
BEST1O76090 AL355312.1-201ENST00000407115 2176 ntBASIC18.57■□□□□ 0.56
BEST1O76090 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.56■□□□□ 0.56
BEST1O76090 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
BEST1O76090 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.56■□□□□ 0.56
BEST1O76090 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.56■□□□□ 0.56
BEST1O76090 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.56■□□□□ 0.56
BEST1O76090 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
BEST1O76090 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.56■□□□□ 0.56
BEST1O76090 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
BEST1O76090 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.56■□□□□ 0.56
BEST1O76090 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
BEST1O76090 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
BEST1O76090 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.56■□□□□ 0.56
BEST1O76090 FAM197Y8-203ENST00000450145 560 ntBASIC18.56■□□□□ 0.56
BEST1O76090 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
BEST1O76090 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
BEST1O76090 NKAPP1-205ENST00000585790 367 ntBASIC18.56■□□□□ 0.56
BEST1O76090 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
BEST1O76090 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
BEST1O76090 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
BEST1O76090 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.56■□□□□ 0.56
BEST1O76090 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BEST1O76090 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
BEST1O76090 NOC2LP2-201ENST00000407594 1944 ntBASIC18.56■□□□□ 0.56
BEST1O76090 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BEST1O76090 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BEST1O76090 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
BEST1O76090 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms