Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
NDUFS3O75489 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NDUFS3O75489 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.71■□□□□ 0.43
NDUFS3O75489 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NDUFS3O75489 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
NDUFS3O75489 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
NDUFS3O75489 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.42
NDUFS3O75489 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
NDUFS3O75489 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NDUFS3O75489 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.7■□□□□ 0.42
NDUFS3O75489 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.7■□□□□ 0.42
NDUFS3O75489 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
NDUFS3O75489 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.7■□□□□ 0.42
NDUFS3O75489 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NDUFS3O75489 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
NDUFS3O75489 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
NDUFS3O75489 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.7■□□□□ 0.42
NDUFS3O75489 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NDUFS3O75489 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NDUFS3O75489 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NDUFS3O75489 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
NDUFS3O75489 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
NDUFS3O75489 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
NDUFS3O75489 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
NDUFS3O75489 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
NDUFS3O75489 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.7■□□□□ 0.42
NDUFS3O75489 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NDUFS3O75489 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NDUFS3O75489 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NDUFS3O75489 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
NDUFS3O75489 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.7■□□□□ 0.42
NDUFS3O75489 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
NDUFS3O75489 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.7■□□□□ 0.42
NDUFS3O75489 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.7■□□□□ 0.42
NDUFS3O75489 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
NDUFS3O75489 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
NDUFS3O75489 AL590326.2-201ENST00000625139 305 ntBASIC17.7■□□□□ 0.42
NDUFS3O75489 AL121956.5-201ENST00000625261 221 ntBASIC17.7■□□□□ 0.42
NDUFS3O75489 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
NDUFS3O75489 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NDUFS3O75489 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NDUFS3O75489 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NDUFS3O75489 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.7■□□□□ 0.42
NDUFS3O75489 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NDUFS3O75489 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
NDUFS3O75489 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NDUFS3O75489 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.69■□□□□ 0.42
NDUFS3O75489 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NDUFS3O75489 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
NDUFS3O75489 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
NDUFS3O75489 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
NDUFS3O75489 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NDUFS3O75489 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NDUFS3O75489 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NDUFS3O75489 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.69■□□□□ 0.42
NDUFS3O75489 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.69■□□□□ 0.42
NDUFS3O75489 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.69■□□□□ 0.42
NDUFS3O75489 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.69■□□□□ 0.42
NDUFS3O75489 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NDUFS3O75489 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NDUFS3O75489 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NDUFS3O75489 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NDUFS3O75489 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.69■□□□□ 0.42
NDUFS3O75489 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NDUFS3O75489 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
NDUFS3O75489 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NDUFS3O75489 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
NDUFS3O75489 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
NDUFS3O75489 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
NDUFS3O75489 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.68■□□□□ 0.42
NDUFS3O75489 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NDUFS3O75489 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.68■□□□□ 0.42
NDUFS3O75489 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NDUFS3O75489 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NDUFS3O75489 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NDUFS3O75489 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NDUFS3O75489 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NDUFS3O75489 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NDUFS3O75489 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NDUFS3O75489 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
NDUFS3O75489 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NDUFS3O75489 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.68■□□□□ 0.42
NDUFS3O75489 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.68■□□□□ 0.42
NDUFS3O75489 AC087388.1-201ENST00000571370 1112 ntBASIC17.68■□□□□ 0.42
NDUFS3O75489 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NDUFS3O75489 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.68■□□□□ 0.42
NDUFS3O75489 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
NDUFS3O75489 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NDUFS3O75489 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NDUFS3O75489 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
NDUFS3O75489 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
NDUFS3O75489 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NDUFS3O75489 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NDUFS3O75489 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.68■□□□□ 0.42
NDUFS3O75489 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NDUFS3O75489 AC133963.1-201ENST00000504166 1679 ntBASIC17.67■□□□□ 0.42
NDUFS3O75489 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NDUFS3O75489 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NDUFS3O75489 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NDUFS3O75489 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms