Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
PTP4A3O75365 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PTP4A3O75365 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.98■□□□□ 0.15
PTP4A3O75365 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC15.98■□□□□ 0.15
PTP4A3O75365 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.98■□□□□ 0.15
PTP4A3O75365 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PTP4A3O75365 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC15.98■□□□□ 0.15
PTP4A3O75365 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PTP4A3O75365 GXYLT1P3-201ENST00000453058 1193 ntBASIC15.98■□□□□ 0.15
PTP4A3O75365 YBX1P2-201ENST00000489612 999 ntBASIC15.98■□□□□ 0.15
PTP4A3O75365 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PTP4A3O75365 AC016396.2-201ENST00000562575 1417 ntBASIC15.98■□□□□ 0.15
PTP4A3O75365 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC15.98■□□□□ 0.15
PTP4A3O75365 NAA38-203ENST00000575071 553 ntTSL 2 BASIC15.98■□□□□ 0.15
PTP4A3O75365 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC15.98■□□□□ 0.15
PTP4A3O75365 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PTP4A3O75365 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PTP4A3O75365 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PTP4A3O75365 AC097493.4-201ENST00000641197 219 ntBASIC15.98■□□□□ 0.15
PTP4A3O75365 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
PTP4A3O75365 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PTP4A3O75365 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
PTP4A3O75365 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC15.98■□□□□ 0.15
PTP4A3O75365 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PTP4A3O75365 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.98■□□□□ 0.15
PTP4A3O75365 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
PTP4A3O75365 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.98■□□□□ 0.15
PTP4A3O75365 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PTP4A3O75365 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PTP4A3O75365 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.97■□□□□ 0.15
PTP4A3O75365 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
PTP4A3O75365 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTP4A3O75365 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTP4A3O75365 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PTP4A3O75365 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTP4A3O75365 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
PTP4A3O75365 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
PTP4A3O75365 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTP4A3O75365 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
PTP4A3O75365 LYSMD4-203ENST00000378904 2122 ntBASIC15.97■□□□□ 0.15
PTP4A3O75365 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.97■□□□□ 0.15
PTP4A3O75365 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTP4A3O75365 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTP4A3O75365 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTP4A3O75365 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTP4A3O75365 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.97■□□□□ 0.15
PTP4A3O75365 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTP4A3O75365 MTCL1P1-201ENST00000446207 792 ntBASIC15.97■□□□□ 0.15
PTP4A3O75365 AP003733.1-201ENST00000491725 852 ntBASIC15.97■□□□□ 0.15
PTP4A3O75365 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC15.97■□□□□ 0.15
PTP4A3O75365 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC15.97■□□□□ 0.15
PTP4A3O75365 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTP4A3O75365 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC15.97■□□□□ 0.15
PTP4A3O75365 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
PTP4A3O75365 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC15.97■□□□□ 0.15
PTP4A3O75365 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTP4A3O75365 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PTP4A3O75365 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
PTP4A3O75365 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTP4A3O75365 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
PTP4A3O75365 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
PTP4A3O75365 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC15.97■□□□□ 0.15
PTP4A3O75365 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTP4A3O75365 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PTP4A3O75365 AL353692.3-201ENST00000407031 1396 ntBASIC15.97■□□□□ 0.15
PTP4A3O75365 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
PTP4A3O75365 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTP4A3O75365 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTP4A3O75365 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PTP4A3O75365 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTP4A3O75365 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.97■□□□□ 0.15
PTP4A3O75365 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTP4A3O75365 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTP4A3O75365 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTP4A3O75365 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTP4A3O75365 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
PTP4A3O75365 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
PTP4A3O75365 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC15.96■□□□□ 0.15
PTP4A3O75365 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTP4A3O75365 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTP4A3O75365 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.96■□□□□ 0.15
PTP4A3O75365 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PTP4A3O75365 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
PTP4A3O75365 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PTP4A3O75365 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTP4A3O75365 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTP4A3O75365 TERF1P1-201ENST00000311003 1181 ntBASIC15.96■□□□□ 0.15
PTP4A3O75365 COPE-203ENST00000351079 907 ntTSL 2 BASIC15.96■□□□□ 0.15
PTP4A3O75365 AC113347.1-201ENST00000413321 391 ntBASIC15.96■□□□□ 0.15
PTP4A3O75365 AC096633.1-201ENST00000422446 749 ntBASIC15.96■□□□□ 0.15
PTP4A3O75365 AC117947.1-201ENST00000427448 529 ntBASIC15.96■□□□□ 0.15
PTP4A3O75365 AL137013.1-201ENST00000432946 1228 ntBASIC15.96■□□□□ 0.15
PTP4A3O75365 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PTP4A3O75365 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC15.96■□□□□ 0.15
PTP4A3O75365 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC15.96■□□□□ 0.15
PTP4A3O75365 ZNF444P1-201ENST00000559497 298 ntBASIC15.96■□□□□ 0.15
PTP4A3O75365 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
PTP4A3O75365 AC005363.2-201ENST00000618631 242 ntBASIC15.96■□□□□ 0.15
PTP4A3O75365 ANKRD20A8P-203ENST00000641373 517 ntBASIC15.96■□□□□ 0.15
PTP4A3O75365 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms