Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CNOT3O75175 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
CNOT3O75175 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CNOT3O75175 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CNOT3O75175 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CNOT3O75175 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CNOT3O75175 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CNOT3O75175 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CNOT3O75175 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.24■□□□□ 0.35
CNOT3O75175 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CNOT3O75175 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CNOT3O75175 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CNOT3O75175 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
CNOT3O75175 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CNOT3O75175 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CNOT3O75175 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CNOT3O75175 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.23■□□□□ 0.35
CNOT3O75175 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CNOT3O75175 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CNOT3O75175 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CNOT3O75175 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CNOT3O75175 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CNOT3O75175 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CNOT3O75175 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CNOT3O75175 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CNOT3O75175 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CNOT3O75175 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.23■□□□□ 0.35
CNOT3O75175 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CNOT3O75175 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.23■□□□□ 0.35
CNOT3O75175 AC009065.1-201ENST00000564055 1225 ntBASIC17.23■□□□□ 0.35
CNOT3O75175 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CNOT3O75175 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.23■□□□□ 0.35
CNOT3O75175 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.23■□□□□ 0.35
CNOT3O75175 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.23■□□□□ 0.35
CNOT3O75175 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.23■□□□□ 0.35
CNOT3O75175 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CNOT3O75175 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.23■□□□□ 0.35
CNOT3O75175 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CNOT3O75175 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CNOT3O75175 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CNOT3O75175 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CNOT3O75175 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
CNOT3O75175 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CNOT3O75175 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.23■□□□□ 0.35
CNOT3O75175 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CNOT3O75175 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.23■□□□□ 0.35
CNOT3O75175 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.23■□□□□ 0.35
CNOT3O75175 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CNOT3O75175 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CNOT3O75175 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.22■□□□□ 0.35
CNOT3O75175 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CNOT3O75175 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CNOT3O75175 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CNOT3O75175 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CNOT3O75175 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CNOT3O75175 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.22■□□□□ 0.35
CNOT3O75175 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CNOT3O75175 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CNOT3O75175 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.22■□□□□ 0.35
CNOT3O75175 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CNOT3O75175 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CNOT3O75175 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.22■□□□□ 0.35
CNOT3O75175 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CNOT3O75175 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CNOT3O75175 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.22■□□□□ 0.35
CNOT3O75175 LINC00265-3P-201ENST00000447588 903 ntBASIC17.22■□□□□ 0.35
CNOT3O75175 TOB2P1-201ENST00000469761 992 ntBASIC17.22■□□□□ 0.35
CNOT3O75175 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CNOT3O75175 PRELID1P1-202ENST00000567272 903 ntBASIC17.22■□□□□ 0.35
CNOT3O75175 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.22■□□□□ 0.35
CNOT3O75175 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.22■□□□□ 0.35
CNOT3O75175 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.22■□□□□ 0.35
CNOT3O75175 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.22■□□□□ 0.35
CNOT3O75175 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.22■□□□□ 0.35
CNOT3O75175 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CNOT3O75175 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CNOT3O75175 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CNOT3O75175 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CNOT3O75175 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CNOT3O75175 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CNOT3O75175 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CNOT3O75175 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.22■□□□□ 0.35
CNOT3O75175 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CNOT3O75175 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.22■□□□□ 0.35
CNOT3O75175 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CNOT3O75175 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CNOT3O75175 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.22■□□□□ 0.35
CNOT3O75175 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CNOT3O75175 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNOT3O75175 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNOT3O75175 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNOT3O75175 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNOT3O75175 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CNOT3O75175 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CNOT3O75175 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNOT3O75175 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
CNOT3O75175 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CNOT3O75175 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.21■□□□□ 0.35
CNOT3O75175 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNOT3O75175 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms