Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.84■□□□□ 0.29
SCN2BO60939 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.84■□□□□ 0.29
SCN2BO60939 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.84■□□□□ 0.29
SCN2BO60939 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.84■□□□□ 0.29
SCN2BO60939 AC004263.2-201ENST00000617183 678 ntBASIC16.84■□□□□ 0.29
SCN2BO60939 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SCN2BO60939 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SCN2BO60939 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SCN2BO60939 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SCN2BO60939 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SCN2BO60939 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.84■□□□□ 0.29
SCN2BO60939 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SCN2BO60939 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SCN2BO60939 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.83■□□□□ 0.29
SCN2BO60939 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
SCN2BO60939 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.83■□□□□ 0.28
SCN2BO60939 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SCN2BO60939 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SCN2BO60939 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SCN2BO60939 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SCN2BO60939 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SCN2BO60939 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SCN2BO60939 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SCN2BO60939 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SCN2BO60939 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.83■□□□□ 0.28
SCN2BO60939 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SCN2BO60939 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SCN2BO60939 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
SCN2BO60939 COX11P1-201ENST00000489116 835 ntBASIC16.83■□□□□ 0.28
SCN2BO60939 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.83■□□□□ 0.28
SCN2BO60939 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SCN2BO60939 AC011558.1-201ENST00000623459 338 ntBASIC16.83■□□□□ 0.28
SCN2BO60939 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SCN2BO60939 AL031432.5-201ENST00000641059 760 ntBASIC16.83■□□□□ 0.28
SCN2BO60939 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.83■□□□□ 0.28
SCN2BO60939 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SCN2BO60939 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SCN2BO60939 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SCN2BO60939 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCN2BO60939 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SCN2BO60939 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SCN2BO60939 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCN2BO60939 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SCN2BO60939 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SCN2BO60939 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SCN2BO60939 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SCN2BO60939 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCN2BO60939 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCN2BO60939 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.82■□□□□ 0.28
SCN2BO60939 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.82■□□□□ 0.28
SCN2BO60939 AC073508.3-201ENST00000619697 1419 ntBASIC16.82■□□□□ 0.28
SCN2BO60939 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SCN2BO60939 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SCN2BO60939 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCN2BO60939 STARP1-201ENST00000397973 869 ntBASIC16.82■□□□□ 0.28
SCN2BO60939 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.82■□□□□ 0.28
SCN2BO60939 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCN2BO60939 AC140113.3-201ENST00000605663 199 ntBASIC16.82■□□□□ 0.28
SCN2BO60939 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCN2BO60939 AC009154.2-201ENST00000621177 724 ntBASIC16.82■□□□□ 0.28
SCN2BO60939 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCN2BO60939 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
SCN2BO60939 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SCN2BO60939 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCN2BO60939 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SCN2BO60939 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCN2BO60939 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCN2BO60939 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCN2BO60939 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.82■□□□□ 0.28
SCN2BO60939 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SCN2BO60939 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCN2BO60939 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCN2BO60939 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCN2BO60939 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SCN2BO60939 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SCN2BO60939 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCN2BO60939 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCN2BO60939 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SCN2BO60939 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
SCN2BO60939 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCN2BO60939 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCN2BO60939 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCN2BO60939 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
SCN2BO60939 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.81■□□□□ 0.28
SCN2BO60939 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCN2BO60939 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SCN2BO60939 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.81■□□□□ 0.28
SCN2BO60939 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.81■□□□□ 0.28
SCN2BO60939 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SCN2BO60939 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.81■□□□□ 0.28
SCN2BO60939 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.81■□□□□ 0.28
SCN2BO60939 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SCN2BO60939 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCN2BO60939 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SCN2BO60939 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCN2BO60939 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SCN2BO60939 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCN2BO60939 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SCN2BO60939 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.81■□□□□ 0.28
SCN2BO60939 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms