Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
URB1O60287 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
URB1O60287 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.75■□□□□ 0.27
URB1O60287 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
URB1O60287 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
URB1O60287 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
URB1O60287 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.75■□□□□ 0.27
URB1O60287 Z92544.3-201ENST00000624747 417 ntBASIC16.75■□□□□ 0.27
URB1O60287 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
URB1O60287 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
URB1O60287 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
URB1O60287 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
URB1O60287 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
URB1O60287 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
URB1O60287 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
URB1O60287 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
URB1O60287 AL024508.2-201ENST00000607749 1894 ntBASIC16.74■□□□□ 0.27
URB1O60287 PMPCAP1-201ENST00000508114 1576 ntBASIC16.74■□□□□ 0.27
URB1O60287 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
URB1O60287 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.74■□□□□ 0.27
URB1O60287 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
URB1O60287 AC005225.4-201ENST00000557330 545 ntBASIC16.74■□□□□ 0.27
URB1O60287 AC087641.1-201ENST00000557561 1021 ntBASIC16.74■□□□□ 0.27
URB1O60287 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.74■□□□□ 0.27
URB1O60287 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
URB1O60287 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
URB1O60287 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
URB1O60287 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
URB1O60287 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
URB1O60287 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.74■□□□□ 0.27
URB1O60287 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.74■□□□□ 0.27
URB1O60287 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
URB1O60287 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
URB1O60287 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
URB1O60287 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
URB1O60287 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
URB1O60287 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
URB1O60287 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC16.73■□□□□ 0.27
URB1O60287 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.73■□□□□ 0.27
URB1O60287 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.73■□□□□ 0.27
URB1O60287 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.73■□□□□ 0.27
URB1O60287 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.73■□□□□ 0.27
URB1O60287 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
URB1O60287 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.73■□□□□ 0.27
URB1O60287 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
URB1O60287 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
URB1O60287 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
URB1O60287 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC16.73■□□□□ 0.27
URB1O60287 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
URB1O60287 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
URB1O60287 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
URB1O60287 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
URB1O60287 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
URB1O60287 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
URB1O60287 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
URB1O60287 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
URB1O60287 LINC00602-201ENST00000629776 2065 ntBASIC16.73■□□□□ 0.27
URB1O60287 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
URB1O60287 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
URB1O60287 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.73■□□□□ 0.27
URB1O60287 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.73■□□□□ 0.27
URB1O60287 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.73■□□□□ 0.27
URB1O60287 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.73■□□□□ 0.27
URB1O60287 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.73■□□□□ 0.27
URB1O60287 AC093214.1-201ENST00000511688 1107 ntBASIC16.73■□□□□ 0.27
URB1O60287 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.73■□□□□ 0.27
URB1O60287 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.73■□□□□ 0.27
URB1O60287 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.73■□□□□ 0.27
URB1O60287 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
URB1O60287 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
URB1O60287 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
URB1O60287 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
URB1O60287 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.72■□□□□ 0.27
URB1O60287 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
URB1O60287 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.72■□□□□ 0.27
URB1O60287 ACTG1P14-201ENST00000446382 1122 ntBASIC16.72■□□□□ 0.27
URB1O60287 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.72■□□□□ 0.27
URB1O60287 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.72■□□□□ 0.27
URB1O60287 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.72■□□□□ 0.27
URB1O60287 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
URB1O60287 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.72■□□□□ 0.27
URB1O60287 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
URB1O60287 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
URB1O60287 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
URB1O60287 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC16.72■□□□□ 0.27
URB1O60287 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
URB1O60287 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
URB1O60287 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
URB1O60287 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.72■□□□□ 0.27
URB1O60287 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC16.72■□□□□ 0.27
URB1O60287 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
URB1O60287 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
URB1O60287 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
URB1O60287 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.72■□□□□ 0.27
URB1O60287 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
URB1O60287 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
URB1O60287 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
URB1O60287 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.72■□□□□ 0.27
URB1O60287 AC007274.1-201ENST00000439805 662 ntBASIC16.72■□□□□ 0.27
URB1O60287 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms