Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.73■□□□□ 0.43
LDB2O43679 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.73■□□□□ 0.43
LDB2O43679 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
LDB2O43679 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LDB2O43679 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LDB2O43679 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LDB2O43679 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
LDB2O43679 AC139713.2-201ENST00000641328 2723 ntBASIC17.72■□□□□ 0.43
LDB2O43679 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
LDB2O43679 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
LDB2O43679 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
LDB2O43679 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LDB2O43679 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LDB2O43679 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.72■□□□□ 0.43
LDB2O43679 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
LDB2O43679 AC233702.3-201ENST00000578656 1387 ntBASIC17.72■□□□□ 0.43
LDB2O43679 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LDB2O43679 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.72■□□□□ 0.43
LDB2O43679 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.72■□□□□ 0.43
LDB2O43679 MIR3180-1-201ENST00000580374 94 ntBASIC17.72■□□□□ 0.43
LDB2O43679 MIR3180-3-201ENST00000584616 94 ntBASIC17.72■□□□□ 0.43
LDB2O43679 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.72■□□□□ 0.43
LDB2O43679 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
LDB2O43679 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
LDB2O43679 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.72■□□□□ 0.43
LDB2O43679 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.72■□□□□ 0.43
LDB2O43679 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.72■□□□□ 0.43
LDB2O43679 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.72■□□□□ 0.43
LDB2O43679 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LDB2O43679 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
LDB2O43679 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.72■□□□□ 0.43
LDB2O43679 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
LDB2O43679 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.71■□□□□ 0.43
LDB2O43679 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.71■□□□□ 0.43
LDB2O43679 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.71■□□□□ 0.43
LDB2O43679 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LDB2O43679 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LDB2O43679 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.71■□□□□ 0.43
LDB2O43679 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
LDB2O43679 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LDB2O43679 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.71■□□□□ 0.43
LDB2O43679 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LDB2O43679 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
LDB2O43679 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.71■□□□□ 0.43
LDB2O43679 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.71■□□□□ 0.43
LDB2O43679 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.71■□□□□ 0.43
LDB2O43679 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
LDB2O43679 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.71■□□□□ 0.43
LDB2O43679 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LDB2O43679 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.71■□□□□ 0.43
LDB2O43679 AC069148.1-201ENST00000608741 768 ntBASIC17.71■□□□□ 0.43
LDB2O43679 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LDB2O43679 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
LDB2O43679 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.71■□□□□ 0.43
LDB2O43679 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
LDB2O43679 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
LDB2O43679 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
LDB2O43679 AL645608.8-201ENST00000606034 2086 ntBASIC17.71■□□□□ 0.43
LDB2O43679 AC141586.5-201ENST00000624546 2050 ntBASIC17.71■□□□□ 0.43
LDB2O43679 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LDB2O43679 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LDB2O43679 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
LDB2O43679 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
LDB2O43679 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.71■□□□□ 0.43
LDB2O43679 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
LDB2O43679 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LDB2O43679 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LDB2O43679 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LDB2O43679 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
LDB2O43679 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.7■□□□□ 0.42
LDB2O43679 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LDB2O43679 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.7■□□□□ 0.42
LDB2O43679 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.7■□□□□ 0.42
LDB2O43679 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LDB2O43679 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LDB2O43679 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.7■□□□□ 0.42
LDB2O43679 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.7■□□□□ 0.42
LDB2O43679 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LDB2O43679 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.7■□□□□ 0.42
LDB2O43679 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.7■□□□□ 0.42
LDB2O43679 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
LDB2O43679 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.7■□□□□ 0.42
LDB2O43679 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LDB2O43679 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LDB2O43679 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LDB2O43679 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.7■□□□□ 0.42
LDB2O43679 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LDB2O43679 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LDB2O43679 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LDB2O43679 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.7■□□□□ 0.42
LDB2O43679 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LDB2O43679 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LDB2O43679 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LDB2O43679 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LDB2O43679 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LDB2O43679 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.69■□□□□ 0.42
LDB2O43679 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LDB2O43679 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LDB2O43679 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
LDB2O43679 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms