Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
CHMP2AO43633 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC19.96■□□□□ 0.79
CHMP2AO43633 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.96■□□□□ 0.79
CHMP2AO43633 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC19.96■□□□□ 0.79
CHMP2AO43633 AC116407.2-201ENST00000613639 860 ntBASIC19.96■□□□□ 0.79
CHMP2AO43633 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC19.96■□□□□ 0.79
CHMP2AO43633 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHMP2AO43633 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHMP2AO43633 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
CHMP2AO43633 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
CHMP2AO43633 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CHMP2AO43633 AC097374.2-201ENST00000618617 1306 ntBASIC19.96■□□□□ 0.79
CHMP2AO43633 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.79
CHMP2AO43633 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CHMP2AO43633 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.95■□□□□ 0.78
CHMP2AO43633 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.95■□□□□ 0.78
CHMP2AO43633 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHMP2AO43633 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CHMP2AO43633 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHMP2AO43633 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHMP2AO43633 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.95■□□□□ 0.78
CHMP2AO43633 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CHMP2AO43633 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHMP2AO43633 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHMP2AO43633 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHMP2AO43633 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHMP2AO43633 MED16-201ENST00000269814 1199 ntTSL 5 BASIC19.95■□□□□ 0.78
CHMP2AO43633 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CHMP2AO43633 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CHMP2AO43633 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC19.95■□□□□ 0.78
CHMP2AO43633 AC079781.3-201ENST00000449110 356 ntBASIC19.95■□□□□ 0.78
CHMP2AO43633 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
CHMP2AO43633 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC19.95■□□□□ 0.78
CHMP2AO43633 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19.95■□□□□ 0.78
CHMP2AO43633 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
CHMP2AO43633 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CHMP2AO43633 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
CHMP2AO43633 COX5A-204ENST00000567270 579 ntTSL 3 BASIC19.95■□□□□ 0.78
CHMP2AO43633 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC19.95■□□□□ 0.78
CHMP2AO43633 REXO1L6P-202ENST00000619970 1078 ntBASIC19.95■□□□□ 0.78
CHMP2AO43633 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC19.95■□□□□ 0.78
CHMP2AO43633 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
CHMP2AO43633 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CHMP2AO43633 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHMP2AO43633 SIRPAP1-201ENST00000448467 1770 ntBASIC19.95■□□□□ 0.78
CHMP2AO43633 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHMP2AO43633 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.95■□□□□ 0.78
CHMP2AO43633 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CHMP2AO43633 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHMP2AO43633 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHMP2AO43633 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CHMP2AO43633 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
CHMP2AO43633 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHMP2AO43633 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC19.94■□□□□ 0.78
CHMP2AO43633 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CHMP2AO43633 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CHMP2AO43633 AC012317.2-201ENST00000623305 2251 ntBASIC19.94■□□□□ 0.78
CHMP2AO43633 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHMP2AO43633 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
CHMP2AO43633 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.94■□□□□ 0.78
CHMP2AO43633 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHMP2AO43633 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
CHMP2AO43633 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19.94■□□□□ 0.78
CHMP2AO43633 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19.94■□□□□ 0.78
CHMP2AO43633 BMF-207ENST00000559701 630 ntTSL 3 BASIC19.94■□□□□ 0.78
CHMP2AO43633 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC19.94■□□□□ 0.78
CHMP2AO43633 GZMM-202ENST00000592501 941 ntTSL 3 BASIC19.94■□□□□ 0.78
CHMP2AO43633 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
CHMP2AO43633 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC19.94■□□□□ 0.78
CHMP2AO43633 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC19.94■□□□□ 0.78
CHMP2AO43633 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHMP2AO43633 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CHMP2AO43633 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CHMP2AO43633 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHMP2AO43633 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHMP2AO43633 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHMP2AO43633 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
CHMP2AO43633 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC19.93■□□□□ 0.78
CHMP2AO43633 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.93■□□□□ 0.78
CHMP2AO43633 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHMP2AO43633 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.93■□□□□ 0.78
CHMP2AO43633 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
CHMP2AO43633 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHMP2AO43633 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CHMP2AO43633 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.93■□□□□ 0.78
CHMP2AO43633 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHMP2AO43633 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
CHMP2AO43633 SAPCD2P3-201ENST00000455031 850 ntBASIC19.93■□□□□ 0.78
CHMP2AO43633 AF238378.1-201ENST00000526806 358 ntBASIC19.93■□□□□ 0.78
CHMP2AO43633 AP001269.4-201ENST00000609611 512 ntBASIC19.93■□□□□ 0.78
CHMP2AO43633 AL031008.1-201ENST00000619963 541 ntBASIC19.93■□□□□ 0.78
CHMP2AO43633 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHMP2AO43633 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHMP2AO43633 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.93■□□□□ 0.78
CHMP2AO43633 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CHMP2AO43633 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CHMP2AO43633 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC19.93■□□□□ 0.78
CHMP2AO43633 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.93■□□□□ 0.78
CHMP2AO43633 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHMP2AO43633 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms