Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC22.65■■□□□ 1.22
KCNQ3O43525 FIS1-203ENST00000442303 631 ntTSL 3 BASIC22.65■■□□□ 1.22
KCNQ3O43525 ARTN-206ENST00000472435 402 ntTSL 3 BASIC22.65■■□□□ 1.22
KCNQ3O43525 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC22.65■■□□□ 1.22
KCNQ3O43525 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC22.65■■□□□ 1.22
KCNQ3O43525 AC064836.3-201ENST00000607928 673 ntBASIC22.65■■□□□ 1.22
KCNQ3O43525 MIR1199-201ENST00000621445 119 ntBASIC22.65■■□□□ 1.22
KCNQ3O43525 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
KCNQ3O43525 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC22.65■■□□□ 1.22
KCNQ3O43525 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
KCNQ3O43525 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC22.65■■□□□ 1.22
KCNQ3O43525 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC22.65■■□□□ 1.22
KCNQ3O43525 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
KCNQ3O43525 REXO1L11P-201ENST00000620964 1927 ntBASIC22.65■■□□□ 1.22
KCNQ3O43525 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
KCNQ3O43525 GID4-202ENST00000376345 1391 ntTSL 3 BASIC22.64■■□□□ 1.22
KCNQ3O43525 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
KCNQ3O43525 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.22
KCNQ3O43525 PODN-203ENST00000395871 2744 ntTSL 5 BASIC22.64■■□□□ 1.22
KCNQ3O43525 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC22.64■■□□□ 1.21
KCNQ3O43525 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
KCNQ3O43525 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
KCNQ3O43525 RPSAP43-201ENST00000402237 625 ntBASIC22.64■■□□□ 1.21
KCNQ3O43525 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC22.64■■□□□ 1.21
KCNQ3O43525 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
KCNQ3O43525 SIGLEC30P-201ENST00000455569 941 ntBASIC22.64■■□□□ 1.21
KCNQ3O43525 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC22.64■■□□□ 1.21
KCNQ3O43525 AC112482.1-201ENST00000492080 688 ntBASIC22.64■■□□□ 1.21
KCNQ3O43525 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC22.64■■□□□ 1.21
KCNQ3O43525 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC22.64■■□□□ 1.21
KCNQ3O43525 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC22.64■■□□□ 1.21
KCNQ3O43525 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC22.64■■□□□ 1.21
KCNQ3O43525 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
KCNQ3O43525 AC116407.2-201ENST00000613639 860 ntBASIC22.64■■□□□ 1.21
KCNQ3O43525 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC22.64■■□□□ 1.21
KCNQ3O43525 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC22.64■■□□□ 1.21
KCNQ3O43525 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC22.64■■□□□ 1.21
KCNQ3O43525 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC22.63■■□□□ 1.21
KCNQ3O43525 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
KCNQ3O43525 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
KCNQ3O43525 FLJ13224-201ENST00000313737 1514 ntBASIC22.63■■□□□ 1.21
KCNQ3O43525 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
KCNQ3O43525 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC22.63■■□□□ 1.21
KCNQ3O43525 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
KCNQ3O43525 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC22.63■■□□□ 1.21
KCNQ3O43525 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
KCNQ3O43525 STK19B-204ENST00000512515 211 ntBASIC22.63■■□□□ 1.21
KCNQ3O43525 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
KCNQ3O43525 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC22.63■■□□□ 1.21
KCNQ3O43525 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
KCNQ3O43525 BICD1-207ENST00000551848 1962 ntBASIC22.63■■□□□ 1.21
KCNQ3O43525 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
KCNQ3O43525 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
KCNQ3O43525 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC22.63■■□□□ 1.21
KCNQ3O43525 AC009336.1-201ENST00000608941 1553 ntBASIC22.63■■□□□ 1.21
KCNQ3O43525 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
KCNQ3O43525 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
KCNQ3O43525 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC22.63■■□□□ 1.21
KCNQ3O43525 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC22.62■■□□□ 1.21
KCNQ3O43525 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
KCNQ3O43525 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
KCNQ3O43525 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC22.62■■□□□ 1.21
KCNQ3O43525 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
KCNQ3O43525 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
KCNQ3O43525 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC22.62■■□□□ 1.21
KCNQ3O43525 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC22.62■■□□□ 1.21
KCNQ3O43525 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
KCNQ3O43525 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
KCNQ3O43525 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
KCNQ3O43525 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC22.62■■□□□ 1.21
KCNQ3O43525 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC22.62■■□□□ 1.21
KCNQ3O43525 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC22.62■■□□□ 1.21
KCNQ3O43525 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC22.62■■□□□ 1.21
KCNQ3O43525 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC22.62■■□□□ 1.21
KCNQ3O43525 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC22.62■■□□□ 1.21
KCNQ3O43525 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC22.62■■□□□ 1.21
KCNQ3O43525 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
KCNQ3O43525 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC22.62■■□□□ 1.21
KCNQ3O43525 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
KCNQ3O43525 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
KCNQ3O43525 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC22.62■■□□□ 1.21
KCNQ3O43525 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
KCNQ3O43525 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
KCNQ3O43525 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
KCNQ3O43525 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
KCNQ3O43525 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
KCNQ3O43525 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC22.62■■□□□ 1.21
KCNQ3O43525 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
KCNQ3O43525 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
KCNQ3O43525 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
KCNQ3O43525 AC138028.4-201ENST00000564984 1845 ntBASIC22.61■■□□□ 1.21
KCNQ3O43525 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
KCNQ3O43525 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
KCNQ3O43525 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC22.61■■□□□ 1.21
KCNQ3O43525 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC22.61■■□□□ 1.21
KCNQ3O43525 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
KCNQ3O43525 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
KCNQ3O43525 UPF3AP3-201ENST00000420996 769 ntBASIC22.61■■□□□ 1.21
KCNQ3O43525 GPX1P2-201ENST00000429271 606 ntBASIC22.61■■□□□ 1.21
KCNQ3O43525 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms