Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 KRT18P65-201ENST00000439811 1286 ntBASIC16.13■□□□□ 0.17
SMAD9O15198 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.13■□□□□ 0.17
SMAD9O15198 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.13■□□□□ 0.17
SMAD9O15198 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.13■□□□□ 0.17
SMAD9O15198 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SMAD9O15198 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.13■□□□□ 0.17
SMAD9O15198 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.13■□□□□ 0.17
SMAD9O15198 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SMAD9O15198 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SMAD9O15198 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SMAD9O15198 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
SMAD9O15198 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SMAD9O15198 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SMAD9O15198 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SMAD9O15198 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SMAD9O15198 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
SMAD9O15198 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMAD9O15198 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMAD9O15198 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
SMAD9O15198 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
SMAD9O15198 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMAD9O15198 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMAD9O15198 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
SMAD9O15198 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMAD9O15198 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.12■□□□□ 0.17
SMAD9O15198 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.12■□□□□ 0.17
SMAD9O15198 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SMAD9O15198 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMAD9O15198 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
SMAD9O15198 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SMAD9O15198 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.12■□□□□ 0.17
SMAD9O15198 AC090616.6-201ENST00000582640 721 ntBASIC16.12■□□□□ 0.17
SMAD9O15198 AL592071.1-201ENST00000611956 408 ntBASIC16.12■□□□□ 0.17
SMAD9O15198 AC009154.2-201ENST00000621177 724 ntBASIC16.12■□□□□ 0.17
SMAD9O15198 AC093458.2-201ENST00000623150 629 ntBASIC16.12■□□□□ 0.17
SMAD9O15198 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.12■□□□□ 0.17
SMAD9O15198 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMAD9O15198 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMAD9O15198 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMAD9O15198 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.12■□□□□ 0.17
SMAD9O15198 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMAD9O15198 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMAD9O15198 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMAD9O15198 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SMAD9O15198 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
SMAD9O15198 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.12■□□□□ 0.17
SMAD9O15198 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SMAD9O15198 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SMAD9O15198 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
SMAD9O15198 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.12■□□□□ 0.17
SMAD9O15198 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SMAD9O15198 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.11■□□□□ 0.17
SMAD9O15198 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SMAD9O15198 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.11■□□□□ 0.17
SMAD9O15198 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SMAD9O15198 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
SMAD9O15198 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SMAD9O15198 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.11■□□□□ 0.17
SMAD9O15198 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SMAD9O15198 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
SMAD9O15198 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SMAD9O15198 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SMAD9O15198 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SMAD9O15198 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SMAD9O15198 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SMAD9O15198 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.11■□□□□ 0.17
SMAD9O15198 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
SMAD9O15198 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.11■□□□□ 0.17
SMAD9O15198 AP002383.4-201ENST00000442518 975 ntBASIC16.11■□□□□ 0.17
SMAD9O15198 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SMAD9O15198 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.11■□□□□ 0.17
SMAD9O15198 RN7SL606P-201ENST00000472779 293 ntBASIC16.11■□□□□ 0.17
SMAD9O15198 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SMAD9O15198 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.11■□□□□ 0.17
SMAD9O15198 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SMAD9O15198 GUSBP12-201ENST00000513727 720 ntBASIC16.11■□□□□ 0.17
SMAD9O15198 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SMAD9O15198 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.11■□□□□ 0.17
SMAD9O15198 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SMAD9O15198 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.11■□□□□ 0.17
SMAD9O15198 NPAP1P7-201ENST00000613027 823 ntBASIC16.11■□□□□ 0.17
SMAD9O15198 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.11■□□□□ 0.17
SMAD9O15198 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.11■□□□□ 0.17
SMAD9O15198 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SMAD9O15198 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SMAD9O15198 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SMAD9O15198 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SMAD9O15198 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SMAD9O15198 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.11■□□□□ 0.17
SMAD9O15198 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
SMAD9O15198 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
SMAD9O15198 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SMAD9O15198 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SMAD9O15198 OR6D1P-203ENST00000641209 4860 ntBASIC16.11■□□□□ 0.17
SMAD9O15198 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SMAD9O15198 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
SMAD9O15198 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.1■□□□□ 0.17
SMAD9O15198 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.1■□□□□ 0.17
SMAD9O15198 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
SMAD9O15198 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms