Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK2O00526 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK2O00526 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK2O00526 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK2O00526 LGALS8-AS1-201ENST00000487567 1457 ntBASIC14.25□□□□□ -0.13
UPK2O00526 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
UPK2O00526 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC14.24□□□□□ -0.13
UPK2O00526 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
UPK2O00526 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
UPK2O00526 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
UPK2O00526 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UPK2O00526 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
UPK2O00526 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
UPK2O00526 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
UPK2O00526 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UPK2O00526 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UPK2O00526 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
UPK2O00526 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
UPK2O00526 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UPK2O00526 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UPK2O00526 DDT-203ENST00000403754 569 ntTSL 3 BASIC14.24□□□□□ -0.13
UPK2O00526 SPDYE15P-201ENST00000424157 909 ntBASIC14.24□□□□□ -0.13
UPK2O00526 DDT-206ENST00000430101 573 ntTSL 2 BASIC14.24□□□□□ -0.13
UPK2O00526 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC14.24□□□□□ -0.13
UPK2O00526 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC14.24□□□□□ -0.13
UPK2O00526 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC14.24□□□□□ -0.13
UPK2O00526 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
UPK2O00526 LITAF-220ENST00000620789 692 ntTSL 5 BASIC14.24□□□□□ -0.13
UPK2O00526 AC011558.1-201ENST00000623459 338 ntBASIC14.24□□□□□ -0.13
UPK2O00526 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC14.24□□□□□ -0.13
UPK2O00526 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UPK2O00526 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
UPK2O00526 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
UPK2O00526 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC14.24□□□□□ -0.13
UPK2O00526 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
UPK2O00526 BX276092.7-203ENST00000637198 1536 ntBASIC14.24□□□□□ -0.13
UPK2O00526 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC14.24□□□□□ -0.13
UPK2O00526 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
UPK2O00526 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UPK2O00526 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
UPK2O00526 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC14.24□□□□□ -0.13
UPK2O00526 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
UPK2O00526 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
UPK2O00526 OR6D1P-203ENST00000641209 4860 ntBASIC14.24□□□□□ -0.13
UPK2O00526 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
UPK2O00526 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
UPK2O00526 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UPK2O00526 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
UPK2O00526 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
UPK2O00526 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC14.23□□□□□ -0.13
UPK2O00526 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UPK2O00526 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC14.23□□□□□ -0.13
UPK2O00526 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
UPK2O00526 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC14.23□□□□□ -0.13
UPK2O00526 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UPK2O00526 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC14.23□□□□□ -0.13
UPK2O00526 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UPK2O00526 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC14.23□□□□□ -0.13
UPK2O00526 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC14.23□□□□□ -0.13
UPK2O00526 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
UPK2O00526 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
UPK2O00526 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
UPK2O00526 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
UPK2O00526 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC14.23□□□□□ -0.13
UPK2O00526 AC012313.1-201ENST00000593393 3059 ntBASIC14.23□□□□□ -0.13
UPK2O00526 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
UPK2O00526 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UPK2O00526 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UPK2O00526 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UPK2O00526 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC14.23□□□□□ -0.13
UPK2O00526 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
UPK2O00526 BX664615.1-201ENST00000443558 458 ntBASIC14.23□□□□□ -0.13
UPK2O00526 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC14.23□□□□□ -0.13
UPK2O00526 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
UPK2O00526 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
UPK2O00526 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
UPK2O00526 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
UPK2O00526 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
UPK2O00526 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
UPK2O00526 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC14.23□□□□□ -0.13
UPK2O00526 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UPK2O00526 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC14.23□□□□□ -0.13
UPK2O00526 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC14.23□□□□□ -0.13
UPK2O00526 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UPK2O00526 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UPK2O00526 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UPK2O00526 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UPK2O00526 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UPK2O00526 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UPK2O00526 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UPK2O00526 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UPK2O00526 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
UPK2O00526 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
UPK2O00526 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
UPK2O00526 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC14.22□□□□□ -0.13
UPK2O00526 TPR-209ENST00000613151 2478 ntTSL 5 BASIC14.22□□□□□ -0.13
UPK2O00526 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC14.22□□□□□ -0.13
UPK2O00526 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
UPK2O00526 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC14.22□□□□□ -0.13
UPK2O00526 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms