Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC13.62□□□□□ -0.23
NDUFA4O00483 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFA4O00483 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
NDUFA4O00483 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC13.62□□□□□ -0.23
NDUFA4O00483 AC091076.1-201ENST00000610741 619 ntBASIC13.62□□□□□ -0.23
NDUFA4O00483 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFA4O00483 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
NDUFA4O00483 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC13.62□□□□□ -0.23
NDUFA4O00483 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFA4O00483 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC13.62□□□□□ -0.23
NDUFA4O00483 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFA4O00483 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFA4O00483 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFA4O00483 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFA4O00483 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFA4O00483 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC13.62□□□□□ -0.23
NDUFA4O00483 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFA4O00483 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFA4O00483 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
NDUFA4O00483 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
NDUFA4O00483 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC13.61□□□□□ -0.23
NDUFA4O00483 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
NDUFA4O00483 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
NDUFA4O00483 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NDUFA4O00483 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NDUFA4O00483 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NDUFA4O00483 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC13.61□□□□□ -0.23
NDUFA4O00483 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NDUFA4O00483 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NDUFA4O00483 AC016734.2-201ENST00000624325 1377 ntBASIC13.61□□□□□ -0.23
NDUFA4O00483 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
NDUFA4O00483 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC13.61□□□□□ -0.23
NDUFA4O00483 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NDUFA4O00483 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC13.61□□□□□ -0.23
NDUFA4O00483 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC13.61□□□□□ -0.23
NDUFA4O00483 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NDUFA4O00483 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
NDUFA4O00483 BET1L-202ENST00000332865 533 ntTSL 5 BASIC13.61□□□□□ -0.23
NDUFA4O00483 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NDUFA4O00483 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
NDUFA4O00483 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC13.61□□□□□ -0.23
NDUFA4O00483 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC13.61□□□□□ -0.23
NDUFA4O00483 KRT18P35-201ENST00000510488 1269 ntBASIC13.61□□□□□ -0.23
NDUFA4O00483 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC13.61□□□□□ -0.23
NDUFA4O00483 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC13.61□□□□□ -0.23
NDUFA4O00483 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
NDUFA4O00483 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NDUFA4O00483 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC13.61□□□□□ -0.23
NDUFA4O00483 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC13.61□□□□□ -0.23
NDUFA4O00483 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NDUFA4O00483 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NDUFA4O00483 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC13.61□□□□□ -0.23
NDUFA4O00483 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NDUFA4O00483 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
NDUFA4O00483 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NDUFA4O00483 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NDUFA4O00483 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
NDUFA4O00483 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC13.61□□□□□ -0.23
NDUFA4O00483 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NDUFA4O00483 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NDUFA4O00483 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
NDUFA4O00483 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NDUFA4O00483 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
NDUFA4O00483 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
NDUFA4O00483 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC13.61□□□□□ -0.23
NDUFA4O00483 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC13.6□□□□□ -0.23
NDUFA4O00483 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NDUFA4O00483 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
NDUFA4O00483 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC13.6□□□□□ -0.23
NDUFA4O00483 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NDUFA4O00483 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NDUFA4O00483 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
NDUFA4O00483 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC13.6□□□□□ -0.23
NDUFA4O00483 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
NDUFA4O00483 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NDUFA4O00483 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NDUFA4O00483 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NDUFA4O00483 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
NDUFA4O00483 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NDUFA4O00483 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
NDUFA4O00483 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NDUFA4O00483 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NDUFA4O00483 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NDUFA4O00483 AC005332.8-201ENST00000622750 2735 ntBASIC13.6□□□□□ -0.23
NDUFA4O00483 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
NDUFA4O00483 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
NDUFA4O00483 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
NDUFA4O00483 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NDUFA4O00483 ARMC10P1-201ENST00000313754 855 ntBASIC13.6□□□□□ -0.23
NDUFA4O00483 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NDUFA4O00483 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC13.6□□□□□ -0.23
NDUFA4O00483 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
NDUFA4O00483 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC13.6□□□□□ -0.23
NDUFA4O00483 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC13.6□□□□□ -0.23
NDUFA4O00483 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC13.6□□□□□ -0.23
NDUFA4O00483 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NDUFA4O00483 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC13.6□□□□□ -0.23
NDUFA4O00483 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC13.6□□□□□ -0.23
NDUFA4O00483 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC13.6□□□□□ -0.23
NDUFA4O00483 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms