Protein–RNA interactions for Protein: O00443

PIK3C2A, Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha, humanhuman

Predictions only

Length 1,686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C2AO00443 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PIK3C2AO00443 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
PIK3C2AO00443 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PIK3C2AO00443 ENSA-206ENST00000361631 725 ntTSL 2 BASIC23.56■■□□□ 1.36
PIK3C2AO00443 DDT-204ENST00000404092 805 ntTSL 3 BASIC23.56■■□□□ 1.36
PIK3C2AO00443 RNF34-208ENST00000555076 593 ntTSL 3 BASIC23.56■■□□□ 1.36
PIK3C2AO00443 SPCS2P1-201ENST00000561636 679 ntBASIC23.56■■□□□ 1.36
PIK3C2AO00443 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC23.56■■□□□ 1.36
PIK3C2AO00443 MED16-214ENST00000617672 554 ntTSL 5 BASIC23.56■■□□□ 1.36
PIK3C2AO00443 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PIK3C2AO00443 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC23.56■■□□□ 1.36
PIK3C2AO00443 AC025580.3-201ENST00000617932 1424 ntBASIC23.56■■□□□ 1.36
PIK3C2AO00443 AC006116.8-202ENST00000587620 1550 ntBASIC23.56■■□□□ 1.36
PIK3C2AO00443 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
PIK3C2AO00443 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC23.56■■□□□ 1.36
PIK3C2AO00443 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC23.56■■□□□ 1.36
PIK3C2AO00443 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PIK3C2AO00443 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PIK3C2AO00443 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
PIK3C2AO00443 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC23.55■■□□□ 1.36
PIK3C2AO00443 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PIK3C2AO00443 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
PIK3C2AO00443 PAWRP1-201ENST00000451083 565 ntBASIC23.55■■□□□ 1.36
PIK3C2AO00443 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC23.55■■□□□ 1.36
PIK3C2AO00443 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.55■■□□□ 1.36
PIK3C2AO00443 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC23.55■■□□□ 1.36
PIK3C2AO00443 AC022145.2-201ENST00000598203 171 ntBASIC23.55■■□□□ 1.36
PIK3C2AO00443 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC23.55■■□□□ 1.36
PIK3C2AO00443 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PIK3C2AO00443 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PIK3C2AO00443 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PIK3C2AO00443 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PIK3C2AO00443 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PIK3C2AO00443 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC23.55■■□□□ 1.36
PIK3C2AO00443 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PIK3C2AO00443 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PIK3C2AO00443 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PIK3C2AO00443 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC23.54■■□□□ 1.36
PIK3C2AO00443 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PIK3C2AO00443 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC23.54■■□□□ 1.36
PIK3C2AO00443 SLC25A6P2-201ENST00000497974 877 ntBASIC23.54■■□□□ 1.36
PIK3C2AO00443 CXCL1P1-201ENST00000502804 216 ntBASIC23.54■■□□□ 1.36
PIK3C2AO00443 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
PIK3C2AO00443 AC099522.2-201ENST00000607001 744 ntBASIC23.54■■□□□ 1.36
PIK3C2AO00443 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PIK3C2AO00443 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC23.54■■□□□ 1.36
PIK3C2AO00443 HLA-DQB1-201ENST00000374943 1656 ntBASIC23.54■■□□□ 1.36
PIK3C2AO00443 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PIK3C2AO00443 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PIK3C2AO00443 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PIK3C2AO00443 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC23.54■■□□□ 1.36
PIK3C2AO00443 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC23.54■■□□□ 1.36
PIK3C2AO00443 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC23.54■■□□□ 1.36
PIK3C2AO00443 AL645939.2-201ENST00000427340 991 ntBASIC23.54■■□□□ 1.36
PIK3C2AO00443 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PIK3C2AO00443 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC23.54■■□□□ 1.36
PIK3C2AO00443 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC23.54■■□□□ 1.36
PIK3C2AO00443 AC107918.2-201ENST00000530817 355 ntBASIC23.54■■□□□ 1.36
PIK3C2AO00443 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC23.54■■□□□ 1.36
PIK3C2AO00443 IGHV3OR16-6-201ENST00000568775 360 ntBASIC23.54■■□□□ 1.36
PIK3C2AO00443 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC23.54■■□□□ 1.36
PIK3C2AO00443 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
PIK3C2AO00443 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PIK3C2AO00443 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC23.53■■□□□ 1.36
PIK3C2AO00443 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
PIK3C2AO00443 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PIK3C2AO00443 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
PIK3C2AO00443 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PIK3C2AO00443 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PIK3C2AO00443 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PIK3C2AO00443 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PIK3C2AO00443 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC23.53■■□□□ 1.36
PIK3C2AO00443 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PIK3C2AO00443 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC23.53■■□□□ 1.36
PIK3C2AO00443 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PIK3C2AO00443 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC23.53■■□□□ 1.36
PIK3C2AO00443 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC23.53■■□□□ 1.36
PIK3C2AO00443 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC23.53■■□□□ 1.36
PIK3C2AO00443 AC023141.13-201ENST00000604991 943 ntBASIC23.53■■□□□ 1.36
PIK3C2AO00443 AC106028.4-201ENST00000614509 607 ntBASIC23.53■■□□□ 1.36
PIK3C2AO00443 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PIK3C2AO00443 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PIK3C2AO00443 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC23.53■■□□□ 1.36
PIK3C2AO00443 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PIK3C2AO00443 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC23.52■■□□□ 1.36
PIK3C2AO00443 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
PIK3C2AO00443 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PIK3C2AO00443 TNXA-203ENST00000507684 2038 ntBASIC23.52■■□□□ 1.36
PIK3C2AO00443 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC23.52■■□□□ 1.36
PIK3C2AO00443 KRT18P55-202ENST00000578578 1546 ntBASIC23.52■■□□□ 1.36
PIK3C2AO00443 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PIK3C2AO00443 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PIK3C2AO00443 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC23.52■■□□□ 1.36
PIK3C2AO00443 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
PIK3C2AO00443 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
PIK3C2AO00443 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC23.52■■□□□ 1.36
PIK3C2AO00443 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC23.52■■□□□ 1.36
PIK3C2AO00443 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PIK3C2AO00443 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PIK3C2AO00443 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC23.52■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms