Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
O00370 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
O00370 SIRPAP1-201ENST00000448467 1770 ntBASIC18.92■□□□□ 0.62
O00370 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
O00370 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
O00370 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.92■□□□□ 0.62
O00370 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.92■□□□□ 0.62
O00370 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.92■□□□□ 0.62
O00370 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.92■□□□□ 0.62
O00370 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.92■□□□□ 0.62
O00370 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.92■□□□□ 0.62
O00370 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.92■□□□□ 0.62
O00370 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
O00370 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
O00370 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.92■□□□□ 0.62
O00370 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
O00370 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
O00370 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.92■□□□□ 0.62
O00370 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
O00370 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
O00370 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
O00370 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
O00370 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
O00370 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.91■□□□□ 0.62
O00370 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
O00370 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
O00370 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
O00370 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
O00370 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
O00370 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
O00370 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.91■□□□□ 0.62
O00370 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
O00370 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.91■□□□□ 0.62
O00370 LINC00265-3P-201ENST00000447588 903 ntBASIC18.91■□□□□ 0.62
O00370 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.91■□□□□ 0.62
O00370 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.91■□□□□ 0.62
O00370 AL138831.2-201ENST00000606564 490 ntBASIC18.91■□□□□ 0.62
O00370 AC116407.2-201ENST00000613639 860 ntBASIC18.91■□□□□ 0.62
O00370 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
O00370 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.91■□□□□ 0.62
O00370 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
O00370 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
O00370 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
O00370 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
O00370 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
O00370 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
O00370 AC125634.1-201ENST00000438758 1403 ntBASIC18.91■□□□□ 0.62
O00370 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
O00370 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
O00370 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
O00370 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.9■□□□□ 0.62
O00370 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
O00370 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.9■□□□□ 0.62
O00370 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
O00370 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.9■□□□□ 0.62
O00370 AC096633.1-201ENST00000422446 749 ntBASIC18.9■□□□□ 0.62
O00370 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
O00370 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.9■□□□□ 0.62
O00370 VENTXP7-201ENST00000475503 772 ntBASIC18.9■□□□□ 0.62
O00370 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
O00370 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
O00370 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.9■□□□□ 0.62
O00370 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.9■□□□□ 0.62
O00370 AC092329.2-201ENST00000598402 547 ntBASIC18.9■□□□□ 0.62
O00370 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
O00370 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.9■□□□□ 0.62
O00370 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
O00370 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
O00370 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
O00370 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.9■□□□□ 0.62
O00370 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
O00370 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
O00370 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
O00370 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
O00370 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.89■□□□□ 0.62
O00370 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
O00370 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
O00370 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
O00370 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
O00370 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
O00370 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
O00370 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
O00370 DDX43P3-201ENST00000441064 443 ntBASIC18.89■□□□□ 0.61
O00370 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.89■□□□□ 0.61
O00370 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.89■□□□□ 0.61
O00370 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.89■□□□□ 0.61
O00370 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.89■□□□□ 0.61
O00370 Z69720.1-201ENST00000601483 472 ntBASIC18.89■□□□□ 0.61
O00370 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
O00370 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.89■□□□□ 0.61
O00370 AC097374.2-201ENST00000618617 1306 ntBASIC18.89■□□□□ 0.61
O00370 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
O00370 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.89■□□□□ 0.61
O00370 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.89■□□□□ 0.61
O00370 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
O00370 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
O00370 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
O00370 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
O00370 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
O00370 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms