Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AC024243.1-201ENST00000609234 778 ntBASIC18.45■□□□□ 0.54
CCDC188H7C350 AC092865.7-201ENST00000641832 219 ntBASIC18.45■□□□□ 0.54
CCDC188H7C350 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC188H7C350 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC188H7C350 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC188H7C350 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC188H7C350 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC188H7C350 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC188H7C350 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC188H7C350 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC188H7C350 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CCDC188H7C350 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC188H7C350 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CCDC188H7C350 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
CCDC188H7C350 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.44■□□□□ 0.54
CCDC188H7C350 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC188H7C350 AC116353.5-201ENST00000638148 1699 ntBASIC18.44■□□□□ 0.54
CCDC188H7C350 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC188H7C350 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.44■□□□□ 0.54
CCDC188H7C350 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.44■□□□□ 0.54
CCDC188H7C350 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC188H7C350 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.44■□□□□ 0.54
CCDC188H7C350 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC188H7C350 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC188H7C350 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC188H7C350 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.44■□□□□ 0.54
CCDC188H7C350 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC188H7C350 UBE2SP1-201ENST00000450587 669 ntBASIC18.44■□□□□ 0.54
CCDC188H7C350 RBM17P1-201ENST00000453646 1190 ntBASIC18.44■□□□□ 0.54
CCDC188H7C350 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.44■□□□□ 0.54
CCDC188H7C350 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC188H7C350 AP003071.4-201ENST00000562276 1284 ntBASIC18.44■□□□□ 0.54
CCDC188H7C350 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC188H7C350 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.44■□□□□ 0.54
CCDC188H7C350 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.44■□□□□ 0.54
CCDC188H7C350 ITM2C-210ENST00000620962 501 ntBASIC18.44■□□□□ 0.54
CCDC188H7C350 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC188H7C350 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC188H7C350 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
CCDC188H7C350 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC188H7C350 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC188H7C350 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC188H7C350 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC188H7C350 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC188H7C350 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC188H7C350 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.44■□□□□ 0.54
CCDC188H7C350 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC188H7C350 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC188H7C350 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC188H7C350 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC188H7C350 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.43■□□□□ 0.54
CCDC188H7C350 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC188H7C350 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC188H7C350 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC188H7C350 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC18.43■□□□□ 0.54
CCDC188H7C350 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC188H7C350 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC188H7C350 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.43■□□□□ 0.54
CCDC188H7C350 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC188H7C350 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.43■□□□□ 0.54
CCDC188H7C350 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC188H7C350 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.43■□□□□ 0.54
CCDC188H7C350 FITM1-202ENST00000559294 800 ntBASIC18.43■□□□□ 0.54
CCDC188H7C350 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.43■□□□□ 0.54
CCDC188H7C350 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CCDC188H7C350 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC188H7C350 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
CCDC188H7C350 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC188H7C350 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC188H7C350 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC188H7C350 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.43■□□□□ 0.54
CCDC188H7C350 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC188H7C350 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CCDC188H7C350 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC188H7C350 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.43■□□□□ 0.54
CCDC188H7C350 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC188H7C350 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC188H7C350 BX276092.7-203ENST00000637198 1536 ntBASIC18.43■□□□□ 0.54
CCDC188H7C350 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC188H7C350 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC188H7C350 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.43■□□□□ 0.54
CCDC188H7C350 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC188H7C350 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
CCDC188H7C350 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CCDC188H7C350 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC188H7C350 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC188H7C350 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC188H7C350 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CCDC188H7C350 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
CCDC188H7C350 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC188H7C350 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC188H7C350 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CCDC188H7C350 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CCDC188H7C350 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CCDC188H7C350 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC188H7C350 C2orf69P3-201ENST00000565542 1120 ntBASIC18.42■□□□□ 0.54
CCDC188H7C350 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.42■□□□□ 0.54
CCDC188H7C350 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC188H7C350 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC188H7C350 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms