Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC14.44□□□□□ -0.1
LINC00473A8K010 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00473A8K010 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00473A8K010 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
LINC00473A8K010 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00473A8K010 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00473A8K010 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
LINC00473A8K010 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00473A8K010 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00473A8K010 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00473A8K010 TERF1P1-201ENST00000311003 1181 ntBASIC14.44□□□□□ -0.1
LINC00473A8K010 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00473A8K010 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00473A8K010 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00473A8K010 AC113347.1-201ENST00000413321 391 ntBASIC14.44□□□□□ -0.1
LINC00473A8K010 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC14.44□□□□□ -0.1
LINC00473A8K010 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC14.44□□□□□ -0.1
LINC00473A8K010 PPOX-214ENST00000535223 664 ntTSL 3 BASIC14.44□□□□□ -0.1
LINC00473A8K010 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00473A8K010 GXYLT1P4-201ENST00000613576 1192 ntBASIC14.44□□□□□ -0.1
LINC00473A8K010 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
LINC00473A8K010 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC14.44□□□□□ -0.1
LINC00473A8K010 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00473A8K010 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00473A8K010 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00473A8K010 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00473A8K010 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00473A8K010 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00473A8K010 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC14.44□□□□□ -0.1
LINC00473A8K010 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC14.44□□□□□ -0.1
LINC00473A8K010 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00473A8K010 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC14.44□□□□□ -0.1
LINC00473A8K010 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00473A8K010 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
LINC00473A8K010 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
LINC00473A8K010 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00473A8K010 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC00473A8K010 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC14.44□□□□□ -0.1
LINC00473A8K010 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
LINC00473A8K010 HR-201ENST00000312841 5351 ntTSL 5 BASIC14.43□□□□□ -0.1
LINC00473A8K010 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00473A8K010 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00473A8K010 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC14.43□□□□□ -0.1
LINC00473A8K010 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC14.43□□□□□ -0.1
LINC00473A8K010 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00473A8K010 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC14.43□□□□□ -0.1
LINC00473A8K010 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC14.43□□□□□ -0.1
LINC00473A8K010 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00473A8K010 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00473A8K010 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00473A8K010 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00473A8K010 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00473A8K010 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00473A8K010 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
LINC00473A8K010 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC14.43□□□□□ -0.1
LINC00473A8K010 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00473A8K010 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00473A8K010 IGHGP-201ENST00000390555 1178 ntBASIC14.43□□□□□ -0.1
LINC00473A8K010 FAM8A6P-201ENST00000407496 1135 ntBASIC14.43□□□□□ -0.1
LINC00473A8K010 AL137013.1-201ENST00000432946 1228 ntBASIC14.43□□□□□ -0.1
LINC00473A8K010 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC14.43□□□□□ -0.1
LINC00473A8K010 SNX5-210ENST00000481323 562 ntTSL 3 BASIC14.43□□□□□ -0.1
LINC00473A8K010 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC14.43□□□□□ -0.1
LINC00473A8K010 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC14.43□□□□□ -0.1
LINC00473A8K010 AC012306.2-201ENST00000609350 630 ntBASIC14.43□□□□□ -0.1
LINC00473A8K010 AC005363.2-201ENST00000618631 242 ntBASIC14.43□□□□□ -0.1
LINC00473A8K010 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00473A8K010 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00473A8K010 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00473A8K010 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00473A8K010 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
LINC00473A8K010 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00473A8K010 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00473A8K010 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00473A8K010 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC14.43□□□□□ -0.1
LINC00473A8K010 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00473A8K010 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00473A8K010 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00473A8K010 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00473A8K010 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00473A8K010 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
LINC00473A8K010 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00473A8K010 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00473A8K010 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
LINC00473A8K010 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LINC00473A8K010 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
LINC00473A8K010 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC14.42□□□□□ -0.1
LINC00473A8K010 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
LINC00473A8K010 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00473A8K010 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00473A8K010 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
LINC00473A8K010 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC14.42□□□□□ -0.1
LINC00473A8K010 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00473A8K010 BX276092.7-203ENST00000637198 1536 ntBASIC14.42□□□□□ -0.1
LINC00473A8K010 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC14.42□□□□□ -0.1
LINC00473A8K010 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00473A8K010 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00473A8K010 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
LINC00473A8K010 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LINC00473A8K010 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms