Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
YJEFN3A6XGL0 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
YJEFN3A6XGL0 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
YJEFN3A6XGL0 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
YJEFN3A6XGL0 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.48■□□□□ 0.55
YJEFN3A6XGL0 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.48■□□□□ 0.55
YJEFN3A6XGL0 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
YJEFN3A6XGL0 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
YJEFN3A6XGL0 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
YJEFN3A6XGL0 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
YJEFN3A6XGL0 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.48■□□□□ 0.55
YJEFN3A6XGL0 AC103564.2-201ENST00000432853 1299 ntBASIC18.48■□□□□ 0.55
YJEFN3A6XGL0 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.48■□□□□ 0.55
YJEFN3A6XGL0 ABCD1P5-201ENST00000445663 754 ntBASIC18.48■□□□□ 0.55
YJEFN3A6XGL0 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.48■□□□□ 0.55
YJEFN3A6XGL0 AF238378.1-201ENST00000526806 358 ntBASIC18.48■□□□□ 0.55
YJEFN3A6XGL0 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.48■□□□□ 0.55
YJEFN3A6XGL0 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
YJEFN3A6XGL0 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
YJEFN3A6XGL0 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.48■□□□□ 0.55
YJEFN3A6XGL0 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
YJEFN3A6XGL0 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
YJEFN3A6XGL0 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
YJEFN3A6XGL0 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
YJEFN3A6XGL0 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
YJEFN3A6XGL0 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
YJEFN3A6XGL0 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.48■□□□□ 0.55
YJEFN3A6XGL0 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
YJEFN3A6XGL0 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
YJEFN3A6XGL0 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
YJEFN3A6XGL0 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
YJEFN3A6XGL0 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
YJEFN3A6XGL0 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
YJEFN3A6XGL0 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
YJEFN3A6XGL0 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.47■□□□□ 0.55
YJEFN3A6XGL0 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
YJEFN3A6XGL0 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
YJEFN3A6XGL0 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.47■□□□□ 0.55
YJEFN3A6XGL0 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
YJEFN3A6XGL0 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
YJEFN3A6XGL0 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
YJEFN3A6XGL0 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
YJEFN3A6XGL0 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
YJEFN3A6XGL0 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
YJEFN3A6XGL0 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
YJEFN3A6XGL0 SAPCD2P3-201ENST00000455031 850 ntBASIC18.47■□□□□ 0.55
YJEFN3A6XGL0 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.47■□□□□ 0.55
YJEFN3A6XGL0 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
YJEFN3A6XGL0 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
YJEFN3A6XGL0 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.47■□□□□ 0.55
YJEFN3A6XGL0 AD001527.2-201ENST00000622994 785 ntBASIC18.47■□□□□ 0.55
YJEFN3A6XGL0 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.47■□□□□ 0.55
YJEFN3A6XGL0 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
YJEFN3A6XGL0 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
YJEFN3A6XGL0 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
YJEFN3A6XGL0 KRT8P10-201ENST00000450021 1447 ntBASIC18.47■□□□□ 0.55
YJEFN3A6XGL0 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
YJEFN3A6XGL0 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
YJEFN3A6XGL0 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.47■□□□□ 0.55
YJEFN3A6XGL0 AL355312.1-201ENST00000407115 2176 ntBASIC18.47■□□□□ 0.55
YJEFN3A6XGL0 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
YJEFN3A6XGL0 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.46■□□□□ 0.55
YJEFN3A6XGL0 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
YJEFN3A6XGL0 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
YJEFN3A6XGL0 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
YJEFN3A6XGL0 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
YJEFN3A6XGL0 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
YJEFN3A6XGL0 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
YJEFN3A6XGL0 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
YJEFN3A6XGL0 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
YJEFN3A6XGL0 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
YJEFN3A6XGL0 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
YJEFN3A6XGL0 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
YJEFN3A6XGL0 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.46■□□□□ 0.55
YJEFN3A6XGL0 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.46■□□□□ 0.55
YJEFN3A6XGL0 AC106795.1-205ENST00000512851 1056 ntBASIC18.46■□□□□ 0.55
YJEFN3A6XGL0 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.46■□□□□ 0.55
YJEFN3A6XGL0 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.46■□□□□ 0.55
YJEFN3A6XGL0 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.46■□□□□ 0.55
YJEFN3A6XGL0 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
YJEFN3A6XGL0 AP000867.4-201ENST00000641616 219 ntBASIC18.46■□□□□ 0.55
YJEFN3A6XGL0 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.46■□□□□ 0.55
YJEFN3A6XGL0 AP005117.1-201ENST00000584346 1413 ntBASIC18.46■□□□□ 0.55
YJEFN3A6XGL0 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.46■□□□□ 0.55
YJEFN3A6XGL0 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
YJEFN3A6XGL0 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.46■□□□□ 0.55
YJEFN3A6XGL0 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
YJEFN3A6XGL0 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
YJEFN3A6XGL0 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
YJEFN3A6XGL0 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
YJEFN3A6XGL0 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.54
YJEFN3A6XGL0 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
YJEFN3A6XGL0 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
YJEFN3A6XGL0 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
YJEFN3A6XGL0 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
YJEFN3A6XGL0 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
YJEFN3A6XGL0 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
YJEFN3A6XGL0 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.45■□□□□ 0.54
YJEFN3A6XGL0 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
YJEFN3A6XGL0 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms