Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.4■□□□□ 0.54
SRRM3A6NNA2 LINC01311-201ENST00000565162 1445 ntBASIC18.4■□□□□ 0.54
SRRM3A6NNA2 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SRRM3A6NNA2 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC18.4■□□□□ 0.54
SRRM3A6NNA2 AL357033.4-201ENST00000617703 1807 ntBASIC18.4■□□□□ 0.54
SRRM3A6NNA2 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SRRM3A6NNA2 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SRRM3A6NNA2 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SRRM3A6NNA2 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SRRM3A6NNA2 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
SRRM3A6NNA2 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SRRM3A6NNA2 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SRRM3A6NNA2 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.4■□□□□ 0.54
SRRM3A6NNA2 AC008040.2-201ENST00000461049 708 ntBASIC18.4■□□□□ 0.54
SRRM3A6NNA2 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.4■□□□□ 0.54
SRRM3A6NNA2 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.4■□□□□ 0.54
SRRM3A6NNA2 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.4■□□□□ 0.54
SRRM3A6NNA2 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.4■□□□□ 0.54
SRRM3A6NNA2 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC18.4■□□□□ 0.54
SRRM3A6NNA2 HYMAI.1-201ENST00000620949 238 ntBASIC18.4■□□□□ 0.54
SRRM3A6NNA2 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC18.4■□□□□ 0.54
SRRM3A6NNA2 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SRRM3A6NNA2 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SRRM3A6NNA2 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SRRM3A6NNA2 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.4■□□□□ 0.54
SRRM3A6NNA2 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SRRM3A6NNA2 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SRRM3A6NNA2 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SRRM3A6NNA2 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SRRM3A6NNA2 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SRRM3A6NNA2 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SRRM3A6NNA2 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.39■□□□□ 0.54
SRRM3A6NNA2 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SRRM3A6NNA2 AC105020.1-201ENST00000435356 2205 ntBASIC18.39■□□□□ 0.54
SRRM3A6NNA2 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
SRRM3A6NNA2 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
SRRM3A6NNA2 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC18.39■□□□□ 0.54
SRRM3A6NNA2 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.39■□□□□ 0.53
SRRM3A6NNA2 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
SRRM3A6NNA2 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
SRRM3A6NNA2 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
SRRM3A6NNA2 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC18.39■□□□□ 0.53
SRRM3A6NNA2 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
SRRM3A6NNA2 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SRRM3A6NNA2 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SRRM3A6NNA2 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SRRM3A6NNA2 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SRRM3A6NNA2 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.39■□□□□ 0.53
SRRM3A6NNA2 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.39■□□□□ 0.53
SRRM3A6NNA2 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SRRM3A6NNA2 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.39■□□□□ 0.53
SRRM3A6NNA2 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.39■□□□□ 0.53
SRRM3A6NNA2 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.39■□□□□ 0.53
SRRM3A6NNA2 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.39■□□□□ 0.53
SRRM3A6NNA2 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SRRM3A6NNA2 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.39■□□□□ 0.53
SRRM3A6NNA2 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.39■□□□□ 0.53
SRRM3A6NNA2 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SRRM3A6NNA2 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.39■□□□□ 0.53
SRRM3A6NNA2 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SRRM3A6NNA2 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SRRM3A6NNA2 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SRRM3A6NNA2 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SRRM3A6NNA2 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SRRM3A6NNA2 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SRRM3A6NNA2 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
SRRM3A6NNA2 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SRRM3A6NNA2 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
SRRM3A6NNA2 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.39■□□□□ 0.53
SRRM3A6NNA2 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SRRM3A6NNA2 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SRRM3A6NNA2 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SRRM3A6NNA2 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SRRM3A6NNA2 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SRRM3A6NNA2 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.38■□□□□ 0.53
SRRM3A6NNA2 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SRRM3A6NNA2 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SRRM3A6NNA2 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SRRM3A6NNA2 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SRRM3A6NNA2 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.38■□□□□ 0.53
SRRM3A6NNA2 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.38■□□□□ 0.53
SRRM3A6NNA2 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SRRM3A6NNA2 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
SRRM3A6NNA2 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.38■□□□□ 0.53
SRRM3A6NNA2 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC18.38■□□□□ 0.53
SRRM3A6NNA2 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
SRRM3A6NNA2 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.38■□□□□ 0.53
SRRM3A6NNA2 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.38■□□□□ 0.53
SRRM3A6NNA2 KRT18P41-201ENST00000518924 1277 ntBASIC18.38■□□□□ 0.53
SRRM3A6NNA2 AL353719.1-201ENST00000566847 864 ntBASIC18.38■□□□□ 0.53
SRRM3A6NNA2 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.38■□□□□ 0.53
SRRM3A6NNA2 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.38■□□□□ 0.53
SRRM3A6NNA2 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.38■□□□□ 0.53
SRRM3A6NNA2 LINC02084-201ENST00000606069 1096 ntBASIC18.38■□□□□ 0.53
SRRM3A6NNA2 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
SRRM3A6NNA2 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SRRM3A6NNA2 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SRRM3A6NNA2 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SRRM3A6NNA2 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SRRM3A6NNA2 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms