Protein–RNA interactions for Protein: A6NHT5

HMX3, Homeobox protein HMX3, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMX3A6NHT5 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
HMX3A6NHT5 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HMX3A6NHT5 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.41■□□□□ 0.06
HMX3A6NHT5 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
HMX3A6NHT5 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC15.41■□□□□ 0.06
HMX3A6NHT5 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HMX3A6NHT5 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
HMX3A6NHT5 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HMX3A6NHT5 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC15.41■□□□□ 0.06
HMX3A6NHT5 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HMX3A6NHT5 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
HMX3A6NHT5 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.41■□□□□ 0.06
HMX3A6NHT5 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
HMX3A6NHT5 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
HMX3A6NHT5 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
HMX3A6NHT5 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HMX3A6NHT5 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
HMX3A6NHT5 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HMX3A6NHT5 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HMX3A6NHT5 THEM4-205ENST00000489410 643 ntTSL 2 BASIC15.41■□□□□ 0.06
HMX3A6NHT5 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HMX3A6NHT5 RNA5SP413-201ENST00000516373 109 ntBASIC15.41■□□□□ 0.06
HMX3A6NHT5 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC15.41■□□□□ 0.06
HMX3A6NHT5 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HMX3A6NHT5 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC15.41■□□□□ 0.06
HMX3A6NHT5 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC15.41■□□□□ 0.06
HMX3A6NHT5 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
HMX3A6NHT5 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HMX3A6NHT5 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.41■□□□□ 0.06
HMX3A6NHT5 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
HMX3A6NHT5 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
HMX3A6NHT5 AC092068.3-201ENST00000587894 2016 ntBASIC15.41■□□□□ 0.06
HMX3A6NHT5 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
HMX3A6NHT5 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC15.41■□□□□ 0.06
HMX3A6NHT5 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.41■□□□□ 0.06
HMX3A6NHT5 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HMX3A6NHT5 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HMX3A6NHT5 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HMX3A6NHT5 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
HMX3A6NHT5 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HMX3A6NHT5 AL357033.4-201ENST00000617703 1807 ntBASIC15.4■□□□□ 0.06
HMX3A6NHT5 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
HMX3A6NHT5 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMX3A6NHT5 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMX3A6NHT5 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMX3A6NHT5 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMX3A6NHT5 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMX3A6NHT5 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMX3A6NHT5 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMX3A6NHT5 AC104640.1-201ENST00000562617 2109 ntBASIC15.4■□□□□ 0.06
HMX3A6NHT5 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMX3A6NHT5 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMX3A6NHT5 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
HMX3A6NHT5 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
HMX3A6NHT5 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMX3A6NHT5 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC15.4■□□□□ 0.06
HMX3A6NHT5 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
HMX3A6NHT5 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMX3A6NHT5 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC15.4■□□□□ 0.06
HMX3A6NHT5 YBX1P10-201ENST00000444752 975 ntBASIC15.4■□□□□ 0.06
HMX3A6NHT5 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC15.4■□□□□ 0.06
HMX3A6NHT5 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
HMX3A6NHT5 UNC93B5-201ENST00000530315 699 ntBASIC15.4■□□□□ 0.06
HMX3A6NHT5 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC15.4■□□□□ 0.06
HMX3A6NHT5 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMX3A6NHT5 AL121829.2-201ENST00000620908 328 ntBASIC15.4■□□□□ 0.06
HMX3A6NHT5 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
HMX3A6NHT5 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMX3A6NHT5 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.4■□□□□ 0.06
HMX3A6NHT5 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.4■□□□□ 0.06
HMX3A6NHT5 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMX3A6NHT5 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMX3A6NHT5 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HMX3A6NHT5 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HMX3A6NHT5 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HMX3A6NHT5 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMX3A6NHT5 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMX3A6NHT5 GMCL1P1-201ENST00000463439 1581 ntBASIC15.4■□□□□ 0.06
HMX3A6NHT5 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC15.4■□□□□ 0.06
HMX3A6NHT5 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HMX3A6NHT5 KATNBL1P6-202ENST00000562413 1466 ntBASIC15.4■□□□□ 0.06
HMX3A6NHT5 LINC02228-204ENST00000642115 2962 ntBASIC15.39■□□□□ 0.05
HMX3A6NHT5 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HMX3A6NHT5 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
HMX3A6NHT5 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
HMX3A6NHT5 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.39■□□□□ 0.05
HMX3A6NHT5 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HMX3A6NHT5 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HMX3A6NHT5 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.39■□□□□ 0.05
HMX3A6NHT5 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HMX3A6NHT5 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HMX3A6NHT5 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.39■□□□□ 0.05
HMX3A6NHT5 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
HMX3A6NHT5 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.39■□□□□ 0.05
HMX3A6NHT5 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
HMX3A6NHT5 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
HMX3A6NHT5 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HMX3A6NHT5 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC15.39■□□□□ 0.05
HMX3A6NHT5 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC15.39■□□□□ 0.05
HMX3A6NHT5 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms