Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CAPN8A6NHC0 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CAPN8A6NHC0 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.01■□□□□ 0.47
CAPN8A6NHC0 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CAPN8A6NHC0 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CAPN8A6NHC0 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CAPN8A6NHC0 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.01■□□□□ 0.47
CAPN8A6NHC0 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.01■□□□□ 0.47
CAPN8A6NHC0 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.01■□□□□ 0.47
CAPN8A6NHC0 AC112698.1-201ENST00000510299 916 ntBASIC18.01■□□□□ 0.47
CAPN8A6NHC0 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.01■□□□□ 0.47
CAPN8A6NHC0 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CAPN8A6NHC0 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.01■□□□□ 0.47
CAPN8A6NHC0 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.01■□□□□ 0.47
CAPN8A6NHC0 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.01■□□□□ 0.47
CAPN8A6NHC0 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CAPN8A6NHC0 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CAPN8A6NHC0 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CAPN8A6NHC0 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CAPN8A6NHC0 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CAPN8A6NHC0 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CAPN8A6NHC0 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.01■□□□□ 0.47
CAPN8A6NHC0 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CAPN8A6NHC0 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CAPN8A6NHC0 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CAPN8A6NHC0 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CAPN8A6NHC0 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CAPN8A6NHC0 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CAPN8A6NHC0 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CAPN8A6NHC0 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CAPN8A6NHC0 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CAPN8A6NHC0 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CAPN8A6NHC0 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.01■□□□□ 0.47
CAPN8A6NHC0 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18■□□□□ 0.47
CAPN8A6NHC0 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18■□□□□ 0.47
CAPN8A6NHC0 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18■□□□□ 0.47
CAPN8A6NHC0 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CAPN8A6NHC0 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CAPN8A6NHC0 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
CAPN8A6NHC0 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
CAPN8A6NHC0 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18■□□□□ 0.47
CAPN8A6NHC0 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
CAPN8A6NHC0 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18■□□□□ 0.47
CAPN8A6NHC0 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18■□□□□ 0.47
CAPN8A6NHC0 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18■□□□□ 0.47
CAPN8A6NHC0 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CAPN8A6NHC0 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CAPN8A6NHC0 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CAPN8A6NHC0 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18■□□□□ 0.47
CAPN8A6NHC0 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18■□□□□ 0.47
CAPN8A6NHC0 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CAPN8A6NHC0 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CAPN8A6NHC0 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18■□□□□ 0.47
CAPN8A6NHC0 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18■□□□□ 0.47
CAPN8A6NHC0 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18■□□□□ 0.47
CAPN8A6NHC0 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
CAPN8A6NHC0 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18■□□□□ 0.47
CAPN8A6NHC0 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CAPN8A6NHC0 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18■□□□□ 0.47
CAPN8A6NHC0 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18■□□□□ 0.47
CAPN8A6NHC0 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18■□□□□ 0.47
CAPN8A6NHC0 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18■□□□□ 0.47
CAPN8A6NHC0 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CAPN8A6NHC0 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CAPN8A6NHC0 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CAPN8A6NHC0 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CAPN8A6NHC0 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CAPN8A6NHC0 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CAPN8A6NHC0 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CAPN8A6NHC0 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CAPN8A6NHC0 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CAPN8A6NHC0 TNRC18P3-201ENST00000441896 2691 ntBASIC17.99■□□□□ 0.47
CAPN8A6NHC0 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
CAPN8A6NHC0 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CAPN8A6NHC0 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CAPN8A6NHC0 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.99■□□□□ 0.47
CAPN8A6NHC0 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.99■□□□□ 0.47
CAPN8A6NHC0 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
CAPN8A6NHC0 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CAPN8A6NHC0 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CAPN8A6NHC0 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CAPN8A6NHC0 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CAPN8A6NHC0 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CAPN8A6NHC0 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CAPN8A6NHC0 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CAPN8A6NHC0 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CAPN8A6NHC0 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CAPN8A6NHC0 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CAPN8A6NHC0 AP000347.1-202ENST00000435868 847 ntBASIC17.99■□□□□ 0.47
CAPN8A6NHC0 TOB2P1-201ENST00000469761 992 ntBASIC17.99■□□□□ 0.47
CAPN8A6NHC0 VENTXP7-201ENST00000475503 772 ntBASIC17.99■□□□□ 0.47
CAPN8A6NHC0 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CAPN8A6NHC0 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.99■□□□□ 0.47
CAPN8A6NHC0 AC011840.4-201ENST00000578471 627 ntBASIC17.99■□□□□ 0.47
CAPN8A6NHC0 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.99■□□□□ 0.47
CAPN8A6NHC0 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.99■□□□□ 0.47
CAPN8A6NHC0 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CAPN8A6NHC0 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CAPN8A6NHC0 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
CAPN8A6NHC0 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms