Protein–RNA interactions for Protein: A0A1W2PRY6

SMIM27, Small integral membrane protein 27 (Fragment), humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM27A0A1W2PRY6 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SMIM27A0A1W2PRY6 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
SMIM27A0A1W2PRY6 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SMIM27A0A1W2PRY6 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC13.26□□□□□ -0.29
SMIM27A0A1W2PRY6 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SMIM27A0A1W2PRY6 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC13.26□□□□□ -0.29
SMIM27A0A1W2PRY6 AC036111.1-201ENST00000533973 1582 ntBASIC13.26□□□□□ -0.29
SMIM27A0A1W2PRY6 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SMIM27A0A1W2PRY6 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC13.26□□□□□ -0.29
SMIM27A0A1W2PRY6 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SMIM27A0A1W2PRY6 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC13.26□□□□□ -0.29
SMIM27A0A1W2PRY6 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC13.26□□□□□ -0.29
SMIM27A0A1W2PRY6 SOX15-203ENST00000570788 1093 ntBASIC13.26□□□□□ -0.29
SMIM27A0A1W2PRY6 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SMIM27A0A1W2PRY6 MYB-242ENST00000618728 3545 ntTSL 5 BASIC13.26□□□□□ -0.29
SMIM27A0A1W2PRY6 AC132872.4-202ENST00000622924 2756 ntBASIC13.26□□□□□ -0.29
SMIM27A0A1W2PRY6 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC13.26□□□□□ -0.29
SMIM27A0A1W2PRY6 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC13.26□□□□□ -0.29
SMIM27A0A1W2PRY6 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
SMIM27A0A1W2PRY6 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SMIM27A0A1W2PRY6 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
SMIM27A0A1W2PRY6 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC13.26□□□□□ -0.29
SMIM27A0A1W2PRY6 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SMIM27A0A1W2PRY6 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SMIM27A0A1W2PRY6 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC13.25□□□□□ -0.29
SMIM27A0A1W2PRY6 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SMIM27A0A1W2PRY6 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SMIM27A0A1W2PRY6 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SMIM27A0A1W2PRY6 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC13.25□□□□□ -0.29
SMIM27A0A1W2PRY6 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
SMIM27A0A1W2PRY6 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SMIM27A0A1W2PRY6 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SMIM27A0A1W2PRY6 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
SMIM27A0A1W2PRY6 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
SMIM27A0A1W2PRY6 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SMIM27A0A1W2PRY6 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC13.25□□□□□ -0.29
SMIM27A0A1W2PRY6 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
SMIM27A0A1W2PRY6 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SMIM27A0A1W2PRY6 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC13.25□□□□□ -0.29
SMIM27A0A1W2PRY6 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SMIM27A0A1W2PRY6 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
SMIM27A0A1W2PRY6 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC13.25□□□□□ -0.29
SMIM27A0A1W2PRY6 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SMIM27A0A1W2PRY6 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
SMIM27A0A1W2PRY6 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SMIM27A0A1W2PRY6 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
SMIM27A0A1W2PRY6 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
SMIM27A0A1W2PRY6 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC13.25□□□□□ -0.29
SMIM27A0A1W2PRY6 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SMIM27A0A1W2PRY6 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SMIM27A0A1W2PRY6 MIPEPP3-201ENST00000412105 444 ntBASIC13.25□□□□□ -0.29
SMIM27A0A1W2PRY6 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SMIM27A0A1W2PRY6 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC13.25□□□□□ -0.29
SMIM27A0A1W2PRY6 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SMIM27A0A1W2PRY6 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC13.25□□□□□ -0.29
SMIM27A0A1W2PRY6 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC13.25□□□□□ -0.29
SMIM27A0A1W2PRY6 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SMIM27A0A1W2PRY6 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SMIM27A0A1W2PRY6 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
SMIM27A0A1W2PRY6 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
SMIM27A0A1W2PRY6 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SMIM27A0A1W2PRY6 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SMIM27A0A1W2PRY6 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SMIM27A0A1W2PRY6 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SMIM27A0A1W2PRY6 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC13.25□□□□□ -0.29
SMIM27A0A1W2PRY6 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
SMIM27A0A1W2PRY6 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SMIM27A0A1W2PRY6 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SMIM27A0A1W2PRY6 AC078925.2-201ENST00000624013 1973 ntBASIC13.25□□□□□ -0.29
SMIM27A0A1W2PRY6 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SMIM27A0A1W2PRY6 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
SMIM27A0A1W2PRY6 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SMIM27A0A1W2PRY6 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SMIM27A0A1W2PRY6 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC13.25□□□□□ -0.29
SMIM27A0A1W2PRY6 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC13.25□□□□□ -0.29
SMIM27A0A1W2PRY6 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
SMIM27A0A1W2PRY6 AC005052.1-201ENST00000625181 2492 ntBASIC13.24□□□□□ -0.29
SMIM27A0A1W2PRY6 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SMIM27A0A1W2PRY6 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SMIM27A0A1W2PRY6 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC13.24□□□□□ -0.29
SMIM27A0A1W2PRY6 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC13.24□□□□□ -0.29
SMIM27A0A1W2PRY6 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SMIM27A0A1W2PRY6 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
SMIM27A0A1W2PRY6 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
SMIM27A0A1W2PRY6 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SMIM27A0A1W2PRY6 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC13.24□□□□□ -0.29
SMIM27A0A1W2PRY6 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SMIM27A0A1W2PRY6 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC13.24□□□□□ -0.29
SMIM27A0A1W2PRY6 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC13.24□□□□□ -0.29
SMIM27A0A1W2PRY6 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC13.24□□□□□ -0.29
SMIM27A0A1W2PRY6 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SMIM27A0A1W2PRY6 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC13.24□□□□□ -0.29
SMIM27A0A1W2PRY6 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
SMIM27A0A1W2PRY6 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC13.24□□□□□ -0.29
SMIM27A0A1W2PRY6 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
SMIM27A0A1W2PRY6 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SMIM27A0A1W2PRY6 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SMIM27A0A1W2PRY6 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SMIM27A0A1W2PRY6 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC13.24□□□□□ -0.29
SMIM27A0A1W2PRY6 AC004980.1-204ENST00000429707 299 ntBASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms