Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
A0A1W2PRF3 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
A0A1W2PRF3 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC14.61□□□□□ -0.07
A0A1W2PRF3 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
A0A1W2PRF3 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
A0A1W2PRF3 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
A0A1W2PRF3 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
A0A1W2PRF3 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
A0A1W2PRF3 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
A0A1W2PRF3 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
A0A1W2PRF3 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC14.6□□□□□ -0.07
A0A1W2PRF3 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
A0A1W2PRF3 CD276-201ENST00000318424 2738 ntTSL 5 BASIC14.6□□□□□ -0.07
A0A1W2PRF3 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
A0A1W2PRF3 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
A0A1W2PRF3 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
A0A1W2PRF3 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
A0A1W2PRF3 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
A0A1W2PRF3 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
A0A1W2PRF3 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
A0A1W2PRF3 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
A0A1W2PRF3 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
A0A1W2PRF3 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC14.6□□□□□ -0.07
A0A1W2PRF3 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC14.6□□□□□ -0.07
A0A1W2PRF3 NUS1P1-201ENST00000446295 882 ntBASIC14.6□□□□□ -0.07
A0A1W2PRF3 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC14.6□□□□□ -0.07
A0A1W2PRF3 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC14.6□□□□□ -0.07
A0A1W2PRF3 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC14.6□□□□□ -0.07
A0A1W2PRF3 BET1L-206ENST00000486280 665 ntTSL 3 BASIC14.6□□□□□ -0.07
A0A1W2PRF3 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
A0A1W2PRF3 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC14.6□□□□□ -0.07
A0A1W2PRF3 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC14.6□□□□□ -0.07
A0A1W2PRF3 AC005336.2-201ENST00000593183 939 ntBASIC14.6□□□□□ -0.07
A0A1W2PRF3 GXYLT1P4-201ENST00000613576 1192 ntBASIC14.6□□□□□ -0.07
A0A1W2PRF3 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
A0A1W2PRF3 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
A0A1W2PRF3 COMP-202ENST00000425807 2292 ntTSL 2 BASIC14.6□□□□□ -0.07
A0A1W2PRF3 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
A0A1W2PRF3 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
A0A1W2PRF3 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC14.6□□□□□ -0.07
A0A1W2PRF3 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
A0A1W2PRF3 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
A0A1W2PRF3 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
A0A1W2PRF3 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
A0A1W2PRF3 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
A0A1W2PRF3 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
A0A1W2PRF3 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC14.6□□□□□ -0.07
A0A1W2PRF3 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC14.6□□□□□ -0.07
A0A1W2PRF3 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
A0A1W2PRF3 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC14.6□□□□□ -0.07
A0A1W2PRF3 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
A0A1W2PRF3 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
A0A1W2PRF3 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
A0A1W2PRF3 MADD-208ENST00000405573 1823 ntTSL 5 BASIC14.59□□□□□ -0.07
A0A1W2PRF3 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC14.59□□□□□ -0.07
A0A1W2PRF3 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
A0A1W2PRF3 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
A0A1W2PRF3 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
A0A1W2PRF3 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
A0A1W2PRF3 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
A0A1W2PRF3 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
A0A1W2PRF3 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC14.59□□□□□ -0.07
A0A1W2PRF3 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
A0A1W2PRF3 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
A0A1W2PRF3 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
A0A1W2PRF3 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC14.59□□□□□ -0.07
A0A1W2PRF3 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC14.59□□□□□ -0.07
A0A1W2PRF3 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
A0A1W2PRF3 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC14.59□□□□□ -0.07
A0A1W2PRF3 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
A0A1W2PRF3 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
A0A1W2PRF3 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
A0A1W2PRF3 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC14.59□□□□□ -0.07
A0A1W2PRF3 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC14.59□□□□□ -0.07
A0A1W2PRF3 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC14.59□□□□□ -0.07
A0A1W2PRF3 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
A0A1W2PRF3 KRT18P31-201ENST00000506277 1292 ntBASIC14.59□□□□□ -0.07
A0A1W2PRF3 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC14.59□□□□□ -0.07
A0A1W2PRF3 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC14.59□□□□□ -0.07
A0A1W2PRF3 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
A0A1W2PRF3 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
A0A1W2PRF3 LINC01711-201ENST00000598340 967 ntBASIC14.59□□□□□ -0.07
A0A1W2PRF3 AL691432.3-201ENST00000621860 400 ntBASIC14.59□□□□□ -0.07
A0A1W2PRF3 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
A0A1W2PRF3 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
A0A1W2PRF3 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
A0A1W2PRF3 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
A0A1W2PRF3 AP000997.3-201ENST00000623333 2250 ntBASIC14.59□□□□□ -0.07
A0A1W2PRF3 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
A0A1W2PRF3 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC14.59□□□□□ -0.07
A0A1W2PRF3 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC14.59□□□□□ -0.07
A0A1W2PRF3 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
A0A1W2PRF3 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
A0A1W2PRF3 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC14.59□□□□□ -0.07
A0A1W2PRF3 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC14.59□□□□□ -0.07
A0A1W2PRF3 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
A0A1W2PRF3 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC14.58□□□□□ -0.07
A0A1W2PRF3 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
A0A1W2PRF3 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
A0A1W2PRF3 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms