Protein–RNA interactions for Protein: A0A1B0GVL6

TMEM238L, HCG1800530, isoform CRA_b, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238LA0A1B0GVL6 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TMEM238LA0A1B0GVL6 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
TMEM238LA0A1B0GVL6 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TMEM238LA0A1B0GVL6 AC018553.1-201ENST00000616682 1458 ntBASIC12.47□□□□□ -0.41
TMEM238LA0A1B0GVL6 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
TMEM238LA0A1B0GVL6 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
TMEM238LA0A1B0GVL6 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TMEM238LA0A1B0GVL6 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC12.47□□□□□ -0.41
TMEM238LA0A1B0GVL6 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TMEM238LA0A1B0GVL6 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
TMEM238LA0A1B0GVL6 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TMEM238LA0A1B0GVL6 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
TMEM238LA0A1B0GVL6 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TMEM238LA0A1B0GVL6 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TMEM238LA0A1B0GVL6 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TMEM238LA0A1B0GVL6 SNX3-202ENST00000349379 890 ntTSL 2 BASIC12.47□□□□□ -0.41
TMEM238LA0A1B0GVL6 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TMEM238LA0A1B0GVL6 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC12.47□□□□□ -0.41
TMEM238LA0A1B0GVL6 YBX1P1-201ENST00000445822 960 ntBASIC12.47□□□□□ -0.41
TMEM238LA0A1B0GVL6 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
TMEM238LA0A1B0GVL6 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC12.47□□□□□ -0.41
TMEM238LA0A1B0GVL6 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TMEM238LA0A1B0GVL6 KATNBL1P4-201ENST00000503545 918 ntBASIC12.47□□□□□ -0.41
TMEM238LA0A1B0GVL6 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
TMEM238LA0A1B0GVL6 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TMEM238LA0A1B0GVL6 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC12.47□□□□□ -0.41
TMEM238LA0A1B0GVL6 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
TMEM238LA0A1B0GVL6 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
TMEM238LA0A1B0GVL6 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TMEM238LA0A1B0GVL6 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
TMEM238LA0A1B0GVL6 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC12.47□□□□□ -0.41
TMEM238LA0A1B0GVL6 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TMEM238LA0A1B0GVL6 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
TMEM238LA0A1B0GVL6 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TMEM238LA0A1B0GVL6 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TMEM238LA0A1B0GVL6 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TMEM238LA0A1B0GVL6 STK4-201ENST00000372801 2038 ntTSL 2 BASIC12.47□□□□□ -0.41
TMEM238LA0A1B0GVL6 AL138688.1-201ENST00000624851 1594 ntBASIC12.47□□□□□ -0.41
TMEM238LA0A1B0GVL6 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC12.47□□□□□ -0.41
TMEM238LA0A1B0GVL6 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC12.47□□□□□ -0.41
TMEM238LA0A1B0GVL6 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TMEM238LA0A1B0GVL6 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TMEM238LA0A1B0GVL6 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
TMEM238LA0A1B0GVL6 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC12.47□□□□□ -0.41
TMEM238LA0A1B0GVL6 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TMEM238LA0A1B0GVL6 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC12.46□□□□□ -0.41
TMEM238LA0A1B0GVL6 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
TMEM238LA0A1B0GVL6 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
TMEM238LA0A1B0GVL6 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TMEM238LA0A1B0GVL6 FRMD6-AS1-201ENST00000617151 2229 ntBASIC12.46□□□□□ -0.41
TMEM238LA0A1B0GVL6 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC12.46□□□□□ -0.41
TMEM238LA0A1B0GVL6 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TMEM238LA0A1B0GVL6 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC12.46□□□□□ -0.41
TMEM238LA0A1B0GVL6 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TMEM238LA0A1B0GVL6 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
TMEM238LA0A1B0GVL6 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
TMEM238LA0A1B0GVL6 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
TMEM238LA0A1B0GVL6 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
TMEM238LA0A1B0GVL6 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TMEM238LA0A1B0GVL6 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC12.46□□□□□ -0.41
TMEM238LA0A1B0GVL6 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
TMEM238LA0A1B0GVL6 AC018442.1-201ENST00000421439 2061 ntBASIC12.46□□□□□ -0.41
TMEM238LA0A1B0GVL6 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TMEM238LA0A1B0GVL6 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
TMEM238LA0A1B0GVL6 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC12.46□□□□□ -0.41
TMEM238LA0A1B0GVL6 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TMEM238LA0A1B0GVL6 LHPP-203ENST00000392757 840 ntTSL 3 BASIC12.46□□□□□ -0.41
TMEM238LA0A1B0GVL6 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TMEM238LA0A1B0GVL6 ATP5G2P3-201ENST00000429083 425 ntBASIC12.46□□□□□ -0.41
TMEM238LA0A1B0GVL6 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TMEM238LA0A1B0GVL6 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC12.46□□□□□ -0.41
TMEM238LA0A1B0GVL6 AC073575.1-201ENST00000551125 596 ntTSL 3 BASIC12.46□□□□□ -0.41
TMEM238LA0A1B0GVL6 MIR4787-201ENST00000607364 84 ntBASIC12.46□□□□□ -0.41
TMEM238LA0A1B0GVL6 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TMEM238LA0A1B0GVL6 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC12.46□□□□□ -0.41
TMEM238LA0A1B0GVL6 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TMEM238LA0A1B0GVL6 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TMEM238LA0A1B0GVL6 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
TMEM238LA0A1B0GVL6 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
TMEM238LA0A1B0GVL6 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
TMEM238LA0A1B0GVL6 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
TMEM238LA0A1B0GVL6 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC12.46□□□□□ -0.42
TMEM238LA0A1B0GVL6 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
TMEM238LA0A1B0GVL6 LINC00552-201ENST00000625151 2579 ntBASIC12.46□□□□□ -0.42
TMEM238LA0A1B0GVL6 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
TMEM238LA0A1B0GVL6 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
TMEM238LA0A1B0GVL6 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
TMEM238LA0A1B0GVL6 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC12.46□□□□□ -0.42
TMEM238LA0A1B0GVL6 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
TMEM238LA0A1B0GVL6 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
TMEM238LA0A1B0GVL6 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
TMEM238LA0A1B0GVL6 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC12.46□□□□□ -0.42
TMEM238LA0A1B0GVL6 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
TMEM238LA0A1B0GVL6 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TMEM238LA0A1B0GVL6 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
TMEM238LA0A1B0GVL6 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TMEM238LA0A1B0GVL6 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TMEM238LA0A1B0GVL6 KRT8P33-201ENST00000508125 1423 ntBASIC12.45□□□□□ -0.42
TMEM238LA0A1B0GVL6 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC12.45□□□□□ -0.42
TMEM238LA0A1B0GVL6 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms