Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 DUTP2-201ENST00000519164 463 ntBASIC17.42■□□□□ 0.38
PCDHB11Q9Y5F2 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.42■□□□□ 0.38
PCDHB11Q9Y5F2 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.42■□□□□ 0.38
PCDHB11Q9Y5F2 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
PCDHB11Q9Y5F2 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
PCDHB11Q9Y5F2 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHB11Q9Y5F2 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.42■□□□□ 0.38
PCDHB11Q9Y5F2 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHB11Q9Y5F2 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHB11Q9Y5F2 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHB11Q9Y5F2 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
PCDHB11Q9Y5F2 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.42■□□□□ 0.38
PCDHB11Q9Y5F2 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHB11Q9Y5F2 AC022898.2-201ENST00000616822 1312 ntBASIC17.42■□□□□ 0.38
PCDHB11Q9Y5F2 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PCDHB11Q9Y5F2 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
PCDHB11Q9Y5F2 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHB11Q9Y5F2 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
PCDHB11Q9Y5F2 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.41■□□□□ 0.38
PCDHB11Q9Y5F2 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHB11Q9Y5F2 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHB11Q9Y5F2 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHB11Q9Y5F2 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHB11Q9Y5F2 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHB11Q9Y5F2 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
PCDHB11Q9Y5F2 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHB11Q9Y5F2 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.41■□□□□ 0.38
PCDHB11Q9Y5F2 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHB11Q9Y5F2 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHB11Q9Y5F2 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
PCDHB11Q9Y5F2 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
PCDHB11Q9Y5F2 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHB11Q9Y5F2 SAPCD2P3-201ENST00000455031 850 ntBASIC17.41■□□□□ 0.38
PCDHB11Q9Y5F2 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHB11Q9Y5F2 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.41■□□□□ 0.38
PCDHB11Q9Y5F2 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.41■□□□□ 0.38
PCDHB11Q9Y5F2 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.41■□□□□ 0.38
PCDHB11Q9Y5F2 AC120114.3-201ENST00000611923 658 ntBASIC17.41■□□□□ 0.38
PCDHB11Q9Y5F2 AC117500.6-201ENST00000624871 588 ntBASIC17.41■□□□□ 0.38
PCDHB11Q9Y5F2 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.41■□□□□ 0.38
PCDHB11Q9Y5F2 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHB11Q9Y5F2 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
PCDHB11Q9Y5F2 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHB11Q9Y5F2 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.41■□□□□ 0.38
PCDHB11Q9Y5F2 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHB11Q9Y5F2 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
PCDHB11Q9Y5F2 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
PCDHB11Q9Y5F2 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHB11Q9Y5F2 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.4■□□□□ 0.38
PCDHB11Q9Y5F2 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHB11Q9Y5F2 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
PCDHB11Q9Y5F2 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHB11Q9Y5F2 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDHB11Q9Y5F2 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHB11Q9Y5F2 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHB11Q9Y5F2 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHB11Q9Y5F2 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PCDHB11Q9Y5F2 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHB11Q9Y5F2 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHB11Q9Y5F2 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHB11Q9Y5F2 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHB11Q9Y5F2 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHB11Q9Y5F2 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHB11Q9Y5F2 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDHB11Q9Y5F2 NUS1P2-201ENST00000417358 873 ntBASIC17.4■□□□□ 0.38
PCDHB11Q9Y5F2 AL590627.1-203ENST00000421194 1026 ntBASIC17.4■□□□□ 0.38
PCDHB11Q9Y5F2 IGHV3-47-201ENST00000425060 335 ntBASIC17.4■□□□□ 0.38
PCDHB11Q9Y5F2 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHB11Q9Y5F2 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDHB11Q9Y5F2 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDHB11Q9Y5F2 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHB11Q9Y5F2 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
PCDHB11Q9Y5F2 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
PCDHB11Q9Y5F2 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.4■□□□□ 0.38
PCDHB11Q9Y5F2 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.4■□□□□ 0.38
PCDHB11Q9Y5F2 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.4■□□□□ 0.38
PCDHB11Q9Y5F2 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
PCDHB11Q9Y5F2 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHB11Q9Y5F2 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHB11Q9Y5F2 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHB11Q9Y5F2 FLJ13224-201ENST00000313737 1514 ntBASIC17.4■□□□□ 0.38
PCDHB11Q9Y5F2 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PCDHB11Q9Y5F2 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDHB11Q9Y5F2 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHB11Q9Y5F2 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
PCDHB11Q9Y5F2 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDHB11Q9Y5F2 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.4■□□□□ 0.38
PCDHB11Q9Y5F2 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDHB11Q9Y5F2 AP000997.3-201ENST00000623333 2250 ntBASIC17.4■□□□□ 0.38
PCDHB11Q9Y5F2 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PCDHB11Q9Y5F2 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
PCDHB11Q9Y5F2 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
PCDHB11Q9Y5F2 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
PCDHB11Q9Y5F2 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
PCDHB11Q9Y5F2 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
PCDHB11Q9Y5F2 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHB11Q9Y5F2 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.39■□□□□ 0.37
PCDHB11Q9Y5F2 NSUN5P1-202ENST00000421140 1535 ntBASIC17.39■□□□□ 0.37
PCDHB11Q9Y5F2 NSUN5P2-203ENST00000457352 1529 ntBASIC17.39■□□□□ 0.37
PCDHB11Q9Y5F2 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms