Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHB2Q9Y5E7 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHB2Q9Y5E7 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHB2Q9Y5E7 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHB2Q9Y5E7 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHB2Q9Y5E7 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHB2Q9Y5E7 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDHB2Q9Y5E7 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHB2Q9Y5E7 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.42■□□□□ 0.7
PCDHB2Q9Y5E7 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHB2Q9Y5E7 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDHB2Q9Y5E7 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHB2Q9Y5E7 AC007967.3-201ENST00000434308 558 ntBASIC19.42■□□□□ 0.7
PCDHB2Q9Y5E7 SLC25A6P5-201ENST00000435663 894 ntBASIC19.42■□□□□ 0.7
PCDHB2Q9Y5E7 AC018712.1-201ENST00000455767 687 ntBASIC19.42■□□□□ 0.7
PCDHB2Q9Y5E7 SCARNA2-201ENST00000458748 420 ntBASIC19.42■□□□□ 0.7
PCDHB2Q9Y5E7 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHB2Q9Y5E7 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.42■□□□□ 0.7
PCDHB2Q9Y5E7 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC19.42■□□□□ 0.7
PCDHB2Q9Y5E7 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDHB2Q9Y5E7 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
PCDHB2Q9Y5E7 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHB2Q9Y5E7 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHB2Q9Y5E7 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.42■□□□□ 0.7
PCDHB2Q9Y5E7 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHB2Q9Y5E7 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
PCDHB2Q9Y5E7 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PCDHB2Q9Y5E7 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDHB2Q9Y5E7 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
PCDHB2Q9Y5E7 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB2Q9Y5E7 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB2Q9Y5E7 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB2Q9Y5E7 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
PCDHB2Q9Y5E7 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB2Q9Y5E7 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB2Q9Y5E7 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB2Q9Y5E7 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDHB2Q9Y5E7 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB2Q9Y5E7 FAM220CP-201ENST00000395253 831 ntBASIC19.41■□□□□ 0.7
PCDHB2Q9Y5E7 CTNS-203ENST00000399306 803 ntTSL 3 BASIC19.41■□□□□ 0.7
PCDHB2Q9Y5E7 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PCDHB2Q9Y5E7 AC073648.2-201ENST00000510116 352 ntBASIC19.41■□□□□ 0.7
PCDHB2Q9Y5E7 DUTP2-201ENST00000519164 463 ntBASIC19.41■□□□□ 0.7
PCDHB2Q9Y5E7 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC19.41■□□□□ 0.7
PCDHB2Q9Y5E7 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.41■□□□□ 0.7
PCDHB2Q9Y5E7 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDHB2Q9Y5E7 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB2Q9Y5E7 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB2Q9Y5E7 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB2Q9Y5E7 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB2Q9Y5E7 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB2Q9Y5E7 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC19.41■□□□□ 0.7
PCDHB2Q9Y5E7 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB2Q9Y5E7 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PCDHB2Q9Y5E7 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB2Q9Y5E7 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB2Q9Y5E7 AL133373.2-201ENST00000623187 2828 ntBASIC19.41■□□□□ 0.7
PCDHB2Q9Y5E7 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB2Q9Y5E7 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB2Q9Y5E7 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDHB2Q9Y5E7 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB2Q9Y5E7 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC19.41■□□□□ 0.7
PCDHB2Q9Y5E7 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB2Q9Y5E7 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.41■□□□□ 0.7
PCDHB2Q9Y5E7 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.41■□□□□ 0.7
PCDHB2Q9Y5E7 AC008764.6-201ENST00000595909 2069 ntBASIC19.4■□□□□ 0.7
PCDHB2Q9Y5E7 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB2Q9Y5E7 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB2Q9Y5E7 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.4■□□□□ 0.7
PCDHB2Q9Y5E7 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
PCDHB2Q9Y5E7 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PCDHB2Q9Y5E7 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.4■□□□□ 0.7
PCDHB2Q9Y5E7 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDHB2Q9Y5E7 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB2Q9Y5E7 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB2Q9Y5E7 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB2Q9Y5E7 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB2Q9Y5E7 TEX30-205ENST00000376029 959 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDHB2Q9Y5E7 TLE1-202ENST00000376484 666 ntTSL 3 BASIC19.4■□□□□ 0.7
PCDHB2Q9Y5E7 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB2Q9Y5E7 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC19.4■□□□□ 0.7
PCDHB2Q9Y5E7 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC19.4■□□□□ 0.7
PCDHB2Q9Y5E7 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC19.4■□□□□ 0.7
PCDHB2Q9Y5E7 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB2Q9Y5E7 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC19.4■□□□□ 0.7
PCDHB2Q9Y5E7 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDHB2Q9Y5E7 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC19.4■□□□□ 0.7
PCDHB2Q9Y5E7 ABBA01031661.1-201ENST00000634362 1253 ntBASIC19.4■□□□□ 0.7
PCDHB2Q9Y5E7 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
PCDHB2Q9Y5E7 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB2Q9Y5E7 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB2Q9Y5E7 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB2Q9Y5E7 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB2Q9Y5E7 KRT8P47-201ENST00000604727 1398 ntBASIC19.4■□□□□ 0.7
PCDHB2Q9Y5E7 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB2Q9Y5E7 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB2Q9Y5E7 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PCDHB2Q9Y5E7 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PCDHB2Q9Y5E7 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB2Q9Y5E7 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms